Pimephales promelas (fathead minnow): 120471865
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Entry
120471865 CDS
T08155
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b
KO
K02599
Notch 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120471865 (notch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_4
Ank_5
DL-JAG_EGF-like
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
120471865
NCBI-ProteinID:
XP_039517719
LinkDB
All DBs
Position
Unknown
AA seq
2497 aa
AA seq
DB search
MHLFLVRLILLISLITLTQGLECSEKCQNDGTCEPTADGRGECKCLDPYAGSGCQFRNPC
SLSPCRNGGVCHLITSANKVDFVCNCTLGYTDRLCLTPTNNVCLSAPCRNGGTCELTSIY
NYKCKCPPGWSGKNCQQADPCASNPCANGGQCSPFDFDYLCHCTPFFSGQTCKQDVNECA
QSPSPCKNGGVCENEVGTYRCNCPAEYTGKHCETLYQPCNPSPCYHGGTCVQKGETSYEC
SCLPGFSGQNCEENIDDCPDHRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMP
NSCQNGGTCLNTLGGYNCVCVNGWTGDDCSENIDDCADAACYVGATCHDRVASFLCECPH
GRTGLLCHLNDACISNPCQKGSNCDTNPVNGKAICTCPLGYVGPACDQDVDECSLGANPC
EHAGKCINTKGSFQCKCLQGYVGARCELDINECMSNPCQNDATCLDQIGGFHCICMPGYE
GVFCQINTDECSSMPCLNNGKCIDKINNYQCDCPTGFSGSQCQFDIDECASTPCKNGAKC
IDGPNMYTCQCTEGYTGQHCETDVDECLSNPCHYGTCKDGLASFTCSCRAGFTGRLCEIN
INECLSQPCQNGGTCQDRENAYLCICPKGTAGANCEVNLDDCQSNPCDYGRCIDKINGYE
CACEPGYTGKMCNINIDECAINPCHNGGTCIDGVNGFKCLCREGYHDTTCQSQLNECLSN
PCIHGHCEDKVNGYNCICDSGWSGANCDINNNECESNPCMNGGTCKDMTSGYVCSCRAGF
SGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPKPCKNGGV
CKESEDYESFSCVCPEGWQGQTCEVDINECVKNPCQNDAICQNSIGSYKCSCKSGYTGRN
CETDIDDCKPNPCSNGGFCKDAVNAFTCTCLPGFRGSRCEEDINECDSNPCKNGANCTDC
VNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPAGFTGNYCQHDIN
ECDSRPCMNGGTCQDSYGTYKCTCPQGYHGLNCQELVNWCKPSPCKNGGICRQSGTRYSC
QCQTGWTGLYCDVPSVSCEVAAKQQGVEVVRLCRNSGQCLDAGNTHYCHCQAGYTGSYCE
EQVDECIPNPCQNGATCTDYLGGYSCECVPGYHGVNCTDEINECLSQPCQNGGTCIDLIN
TYKCSCPRGTQGVHCEINIDDCTPFTDPITHEPKCFNQGRCVDRVGGYHCICLAGYVGER
CEGDVNECLSNPCDPSGTHSCIQLTNNYRCECRTGYTGQRCEKVFDGCKGKPCRNGGTCA
VASNTPYGFICKCPPGFTGSTCEYDAHACGSLHCKNGGTCVSGHKSPKCLCTPAFTGPEC
QYPTEGHCTINPCYNGGTCEYISEAPYYHCICPTGFNGLFCHILDYSFPGGSGRDITPAP
EVTASCEIAECENKKANKICDSACNNYACDWDGGDCSLNFNDPWQNCSAALQCWRYFNNG
KCDEQCHNAGCLYDGFDCQRLEGQCNPLYDQYCKDHYSDGHCDQGCNNAECEWDGLDCAN
NIPEKLAAGLLVVVVHIMPEQLRNNSFGFLRELSRVLHTNVVFRRDSKGEQMIYPYYGNE
QELRKHNIKRSLDGWNGASSNVMSSLKSGIYNIVVEGGRKRRELDEMQIKGSVVYLEIDN
RQCYQQSSECFQNANDVAAFLGALASSGNLNMPYVIEAVTSKIDGPSTIELYPVYVVLAG
LALLAFIGVGMVASRKRRREHGQLWFPEGFKTSEPSKKKRREPVGEDSVGLRPLKNCSDI
SLMDDNQNEWGEEEPSDTKRFRSEEQAILDLDDQQDHRQWTQQHLDAADLRIPSIAPTPP
QGEIESDCMDVNARGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLHN
QTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVNNVE
AAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRDIAQ
DRMHHDIVRLIDEYNLVRSPPMHSAPLCTTLSPPLCSPNAFMGSMKPLQSKKPRKPSTKG
IGCKDGKDMKVKKKKTQDGKGHLLDSSAVLSPVDSLESPHGYISDVASPPLMTSPFQQSP
SMSLNHLQGIADTHMSVNHLGMGNKQELAHIQFDPLPPRLTHLPVAGSNGSNAMNGQCEW
LGRMHGSMGPQNQFAAMRNATGQANLHQSGLMTSLHNGRPATMSQILNYQSLQNAHLTTQ
PQHLMQQMQSMQQRAQQTGVQLQHQSTNPPSGVSQNFIGGELGGPELQQSAGNSMPIHTI
IPQETQLLNPSSLGPSMAGTQFLTPPSQHSYSNAMDANTPSHQLQVPDHPFLTPSPGSPD
QWSSSSPHSNMSDWSEGISSPPTSMQSQIGHIPEQFK
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttcctcgtgagactaattcttctgatatcactcattactttgacgcaaggc
ctggaatgttcggaaaaatgccaaaatgatggtacatgtgaacctactgcagacgggaga
ggagaatgcaagtgtctcgatccttatgctggctcagggtgccagttccgcaacccttgc
tccctctccccatgcagaaatggtggcgtgtgccatttgattacttctgccaacaaggtg
gactttgtctgcaactgcaccctgggctacacggaccgactgtgcctcactcccaccaat
aacgtgtgccttagcgccccgtgccgaaacggaggcacgtgtgaactcaccagcatctac
aattacaagtgtaaatgcccaccaggctggtcaggtaaaaactgccagcaagctgatcct
tgtgcctcaaatccttgtgccaatggcggtcagtgtagtccctttgattttgactacctc
tgccactgcacacccttcttctcaggccaaacctgcaaacaagacgtcaatgagtgtgca
cagagtccctctccttgcaagaacggtggtgtgtgtgagaacgaggtgggcacgtatcgc
tgcaactgccctgcggagtacaccgggaaacactgcgagaccctctatcagccctgtaac
ccctcaccatgctatcacgggggcacctgcgtacagaagggagagacgagctacgaatgc
tcctgtttgccaggctttagtggtcagaactgcgaggagaacattgatgactgtccagac
catcgctgccttaacggagggacgtgtgtggatggagtgaacacctacaattgccaatgc
aagccagagtggacaggtcagttctgtaccgaagacgtcaatgagtgcgatttgatgccc
aattcctgccagaacggtggtacatgcttgaacacgctgggtggatacaactgtgtgtgt
gtaaacggctggacaggggatgactgcagcgagaacatcgatgactgcgcagatgctgcc
tgctacgtaggagccacatgtcatgatcgggtggcctccttcctctgtgaatgtcctcac
gggcgaacaggtcttctgtgtcacctgaatgatgcttgcattagtaacccatgtcagaaa
ggctcaaactgtgacaccaacccagtcaatggcaaggccatctgtacctgtcctctgggt
tatgttggcccagcctgtgaccaagatgttgacgaatgctctctgggtgcaaacccttgt
gaacatgctggaaagtgtataaacacaaaaggttccttccagtgtaaatgtctgcaggga
tatgtgggagctcggtgtgaactggacataaacgagtgcatgtccaacccatgccagaat
gatgctacctgtttggatcaaattgggggcttccattgcatctgtatgccagggtacgag
ggagtcttctgccaaatcaatactgatgagtgctccagcatgccctgcctcaacaatggg
aagtgcatcgacaagatcaacaactaccaatgcgattgccccacaggattctcgggtagc
caatgccagttcgacatcgatgagtgtgctagcaccccctgtaaaaatggggccaagtgt
attgatgggcccaacatgtacacttgccagtgcactgaaggttacacagggcagcactgt
gagacagacgtagatgagtgtctatccaacccatgtcactatggcacctgtaaagacggc
ctggcatccttcacctgttcctgccgtgcaggtttcacgggtcgtctgtgtgagatcaac
ataaatgagtgtctcagtcagccgtgccaaaatggaggcacctgccaagaccgtgagaat
gcctacttatgcatctgcccaaaaggaaccgcaggtgctaactgtgaggttaacctagat
gactgtcagagcaatccatgcgattatggaaggtgcattgacaagataaatggttacgag
tgtgcctgtgaaccaggatacactgggaaaatgtgtaacatcaatattgatgaatgtgcc
atcaacccctgtcacaatggtggaacctgtattgatggagtcaatggcttcaaatgtctg
tgcagagaggggtatcacgacactacctgccaatcacagctcaacgaatgccttagcaac
ccctgtatccatggacactgtgaagacaaagtcaatggatataactgtatttgtgactcg
ggatggagtggtgccaactgtgacatcaacaacaatgagtgcgagtccaacccctgtatg
aatggaggcacctgtaaggacatgaccagtggctacgtctgctcatgccgtgccggcttc
agtggtcccaactgccaaactaatatcaatgaatgcgcctccaacccttgcttgaatcaa
gggacctgtattgatgacgtggctggatataaatgcaactgtttgctgccttacactggt
gagaactgtgagaccctgttggccccgtgcagccctaaaccttgtaagaatggaggtgta
tgcaaggagtctgaagactacgagagcttctcttgtgtgtgccctgagggatggcaaggc
caaacgtgtgaggtggacattaacgaatgtgtcaaaaacccttgtcaaaacgacgccatc
tgtcaaaactctattggcagctacaaatgcagttgcaaatctggctacactggccgcaac
tgtgagacggacattgacgactgcaagcccaacccttgcagtaatggtggcttctgcaaa
gatgcagtgaatgccttcacttgcacctgcctaccaggtttccggggcagcagatgcgag
gaggacattaatgaatgtgatagtaacccgtgtaaaaatggtgcgaattgcactgattgt
gtgaacagttacacgtgtacctgtccaccgggatttagtgggattcactgtgagaacaac
acacctgactgtactgagagctcttgttttaatggtggcacatgcgtggatggcatcaac
agcttcacttgcctgtgcccagctgggttcactggtaactactgccagcatgacatcaac
gagtgcgactccagaccctgcatgaatggaggcacctgtcaggacagctatggcacatac
aagtgcacctgccctcagggataccatggcctcaactgccaggagctggtgaactggtgt
aagccgtctccctgtaagaatggaggtatctgcagacagagcggcactaggtacagctgc
cagtgtcagacaggctggactggtttatactgtgacgtccccagcgtttcttgcgaggtg
gccgccaaacagcaaggtgtagaggtggttcggctgtgtcgtaactctggccagtgtctg
gatgctggaaacacacactactgtcactgtcaggccggatacacaggcagctactgtgag
gagcaggtggatgaatgcattcccaatccttgccagaacggagcaacctgcaccgactac
ctgggtggctattcctgtgaatgcgtgccaggttatcatggagtgaactgcactgacgag
atcaatgagtgtctgtctcagccctgccagaacgggggcacatgcatcgacctgatcaat
acctacaaatgctcctgtccccggggaacacaaggtgtgcactgcgagatcaacattgac
gactgcacacccttcaccgaccccatcacccacgagcccaaatgctttaaccagggccgc
tgtgtggaccgtgtgggcgggtaccattgcatctgcctggctggatatgtgggggaacgc
tgtgagggtgacgtcaacgaatgcttgtccaacccttgtgaccccagtggcacgcacagc
tgcatccagctcacaaacaactaccgctgcgagtgtcgcacaggatacacaggtcagcgc
tgtgagaaagtgttcgatggctgtaaggggaaaccttgtcgtaatggaggcacctgcgct
gtggctagcaacactccttatggcttcatctgcaaatgtccaccgggttttacaggctca
acctgcgagtacgacgctcatgcttgtgggagcctccactgcaaaaatggcggtacatgc
gtttctggtcacaagagccccaaatgtctgtgcacccctgccttcactggtcctgagtgc
cagtatcccaccgagggtcactgcaccatcaatccctgctacaacggaggcacgtgcgag
tacatctcagaggccccatactaccactgcatctgtcccactggcttcaatggcctcttc
tgccacatcttggactacagcttcccaggcggatctggtcgagacatcacacctgcccca
gaagtgacggcgagctgcgagatagcagagtgtgaaaacaagaaggccaataagatctgt
gacagcgcatgtaataattacgcctgcgattgggatggaggggactgctcactgaacttc
aatgacccgtggcagaactgctcggctgcgctgcagtgctggcgctattttaataacggg
aagtgtgacgaacagtgtcacaacgctggatgcctctatgatggatttgactgccagagg
ctggagggccagtgcaatccactctacgaccagtattgcaaagaccactattcagatggc
cactgtgaccagggctgcaataatgcagagtgcgaatgggacgggctggactgtgccaac
aacatcccagaaaagttagctgctggactcctggttgtggtggtccacattatgcccgag
cagctccgaaacaactccttcggatttctgcgagagctcagcagagtgctccacaccaac
gtcgttttccggcgcgacagcaagggagagcaaatgatctacccgtattacggcaacgag
caggagctgaggaagcacaacatcaaacgatcactagatggctggaacggtgcttctagc
aacgtcatgagctcgctaaaaagcggcatttacaatatagtcgtggaaggagggagaaaa
cgcagagagctggatgagatgcagatcaaaggctcggtggtatacttggagatcgacaac
cggcagtgctaccagcaaagctccgagtgcttccagaatgcaaacgatgtggctgctttc
ctcggagccctggcttccagcggcaatctgaatatgccttacgtcatcgaggccgtcaca
agtaagattgatggaccctcgaccatagagctctatccggtctacgtggttctggcagga
ctggcactgctggcctttatcggcgtgggaatggtcgcttcccgcaaacgccgccgtgaa
catggtcaactttggtttccggagggattcaagactagcgagcccagcaagaagaagagg
agggagccagtcggcgaagactctgttggtctgaggccacttaagaactgttcagacatt
tcattaatggatgacaaccagaatgaatggggagaggaggaaccatcagacaccaaacgc
ttcaggtctgaggagcaggcgattcttgatttagatgatcagcaagatcaccggcagtgg
acgcagcagcacttggacgcagccgatctgcgaatcccatccatcgctcccacaccccct
cagggcgagatcgaaagcgactgcatggacgtcaatgcccgtggaccagatggctttact
cctcttatgatcgcatcttgtagtggaggagggctagaaacagggaacagcgaggaagag
gaggatgcttcagcaaacgtcatcaatgacttcatctaccaaggtgccaaccttcacaac
cagacagaccgcacgggggaaacggctttacacctggccgcccgctatgcccgctcggat
gctgccaaaaggctcctggaggccagtgcagatgccaacatccaggacaatatgggacgg
accccattacatgctgctgtggctgcagatgcacaaggagtcttccagattttgatacgg
aaccgtgccacagacttagatgcccgcatgcatgatggcaccacacctctgatactggca
gcaagactggcggtcgagggcatggtggaggaactcatcaactgccatgctgatgtcaat
gccattgatgattttggtaaatctgctcttcactgggcagcagctgtgaacaacgtagag
gcggcgatggtgttgcttaagaacggagcaaataaagatatgcagaacaacaaggaggag
actcctctgttcttggcagcaagagaaggaagttacgagactgctaaagttctgctcgag
cattttgccaatcgggagatcaccgaccatatggatcggctcccacgggatatcgctcag
gacagaatgcatcacgacatcgttcggctcatcgacgaatacaacctggtccgcagccct
cccatgcacagcgcccccctctgcaccaccctctcccctcctctctgctctcccaacgcc
ttcatgggcagcatgaagcccttacaaagtaagaagccccgcaagcccagcacaaaaggc
atcggttgcaaggatggcaaagacatgaaagtcaagaagaagaagacacaggatggaaag
ggacatttgctagacagctcagccgtgctctcgccggtggattccttggagtcgccccac
gggtacatatctgacgtcgcctccccacccctaatgacatcacccttccagcaatcgccc
tccatgtctcttaatcacttacaaggcatcgcagatacccacatgagcgtcaaccatcta
ggcatgggcaacaagcaggagctggcccacatacagttcgatccgttacccccgcgtctc
acccacctgccagttgccggttcgaacggctcaaacgccatgaacggccaatgcgaatgg
cttggacggatgcacggtagtatgggtcctcaaaatcaattcgcagcaatgaggaacgcc
acaggtcaggccaaccttcaccaatccggcctgatgacttctcttcacaatggccggccc
gctaccatgtctcagattttgaactatcaaagcctgcagaacgcgcacctcaccacacag
ccgcagcatctaatgcagcagatgcagagcatgcaacagagagcgcagcagaccggcgtc
cagctgcagcaccagagcaccaatccacccagtggcgtgagccagaacttcatcggcggt
gagctggggggcccggagctccagcagagcgcagggaacagcatgcccatccacaccata
atcccccaggagacccagttgctgaacccatcctctctgggccccagcatggcgggcacg
cagttcctgacgccaccttcccagcacagttactcaaacgccatggacgccaacaccccc
agccaccaactccaagtgcctgaccaccctttcctcacaccgtctccaggttcaccggac
cagtggtccagctcgtcgccccattccaacatgtctgactggtcggagggcatttccagc
cctcccaccagcatgcagtcgcaaatcggacacataccggagcaattcaaatag
DBGET
integrated database retrieval system
