Pimephales promelas (fathead minnow): 120473231
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Entry
120473231 CDS
T08155
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120473231 (ret)
04020 Calcium signaling pathway
120473231 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprm01001
]
120473231 (ret)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120473231 (ret)
Protein kinases [BR:
pprm01001
]
Receptor tyrosine kinases (RTK)
RET family
120473231 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
Cadherin
HGSNAT_cat
DUF5009
Pkinase_fungal
RIO1
Motif
Other DBs
NCBI-GeneID:
120473231
NCBI-ProteinID:
XP_039518893
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MDLTMKIINILNVFFFTLLSAGMCERRHTVFKLKMDEALLIFHNELPYNISVYYTSHYCY
KCLYQPLATVGNGLNISVVVSTQFTLTLRIAPVDGNGTLCGLSQTFGEAGQYSLWMRQPS
LLNDVTCSLTVDTRPNNAYLPLLAAFLILASVAVFWASLPYILRCSCTQRLKNRICCHRS
QNSMEMEEANNEHCADKSKTKSSRLKSLDTFRGFSLIVMVFVNYGGGGYWFFQHAPWNGL
TVADLVMPWFVFIMGTSVVLAFNSMHRKGVSWLQLLRKVTWRTIVLILIGFCFMNYSPRD
GFLSWSWLRIPGVLQRLGFTYFVLAVMQTFSPQREIPLMKHNWWNPIQDVVLYWPQWLII
VLLETMWLCLTFLLPVPNCPTGYLGAGGIGDDGLYPNCTGGAAAYIDRWLFRDNIFWYPT
CKVLYHTTEPFDPEGVLGTINSIVMGFFGMQAGKILLFFRKMNKGILTRFLIWALILGIS
AAILSKCTRDEGFIPVNKNLWSLSFVTCMGCLSFLLLAVMYFVMDIKEWWGGQPFIYPGM
NSIFVYVGHSLLGFYFPFSWEMHFQDSHWEKLFQNIWGSLGLYFPQRMYTESIYVGQPQG
SPVLQVHSMLESNTERPYFFLCSHRDTYASWFHMDEASGILSMNKTLEWSDFSSIRSSSG
RPNKDLNLKVGVSSVPLQKAMCMFLPTVEVKLVFINDTAPSCGQVDLSKLCYPDKVSNPH
ITENRMPGAFRQLRRFTHMSICPNYTISYGVEAESPVPFAVDSSTSELVVTAPVDREEKE
MYHLDIVCMVQTEEKLWKYFTSLHLNIYDEDDNPPYVNGTDSEDVIIEFNRSEGTVYGTL
FVYDRDTTPVYPTNQIQNKLVGTLMTNDSWIRNTFTIEHKFREEKAIFGNVRGTVHEYKL
KLSQNLSVTEQRSFQLDYLVNDTTFPGPEGTVLLHFNVTILPVPIRFSNITYFFTVSKKA
TTYSQIGEVCVDNCLKFKGIDVTYQLEIAERNISADAQSCYMAVSLAQNPNVKTGVLYVN
DTEVLRRPECQELQYVVIAQEQRNKFQAKTQLVIIFEGEADLMRMDELRVLACAEKRQRG
ECEASRGLGAPTGRCQWRQGKDKGISKKYSTCSPDLRTCPDGYCDAIESKNISICPQDCS
SQPIIGGYERDLYGIKAGHGTCYCFSGKCFCEKDESEEAICDDMCKTVIATGVLLSFIVS
ILLSSYFIHRYHKSTPKPPIASAEMTFRRPAQSYPISYSANNVRRASLDSMENQVAIDTF
KIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSEL
RDLLSEFTLLKQVNHPHVIKMYGACSQDGPLHLIVEYAKYGSLRNFLRESRKVGPSYMSN
DANRNSSYLENPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMK
ISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG
NPYPGIAPERLFNLLKTGYRMEKPENCTDEMYNLMLRCWKQEADKRPTFSDISKELEKMM
VKSRDYLDLAASTPADALLYDDSLSEEDTPLVDCSNAPLPRTLPSTWIENKLYGMSYPNW
PEKSPVPLNRLDATNPVFTRYANDSVYANWMALHSPAIVDTLDS
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggatttgacaatgaagataatcaatatcttgaatgttttcttttttacccttctctca
gcagggatgtgtgaaagacgtcatacagttttcaagctgaaaatggatgaggcattgcta
atattccataatgaacttccatacaacattagtgtttactacacctcacattactgttat
aagtgtctttatcagccccttgccacagttgggaatggtcttaatatttctgtggtggtg
agcacacaattcacactgactctaagaatcgcacctgtggatggaaacggcactctctgc
ggtctgagtcagacgtttggtgaagctggccagtattctctctggatgaggcagcctagc
ttgctaaatgatgtaacctgttctctcactgtggatacgagaccgaataatgcctacctg
ccgctgttggcggcattcttgattctggcttctgtcgctgtattttgggcctctttgcct
tatatactcagatgcagctgtacacagaggctaaagaatcgaatttgctgtcacaggtct
caaaactccatggaaatggaggaggcaaataatgaacattgtgcggacaaaagcaaaaca
aagtcatccagactgaagtcactggacacatttcgaggattctccctgattgtcatggta
tttgtgaactatggaggaggtggttactggttcttccaacatgcaccatggaatggtctc
actgtagccgatcttgtgatgccttggtttgtgttcatcatgggtacttctgtagtgcta
gcattcaactcgatgcatagaaaaggtgtttcatggctacagcttcttcgcaaggttact
tggagaaccatcgtcctgatactcattgggttctgcttcatgaactacagcccaagagat
ggatttttatcctggtcctggctacggatacccggagtgctccagcgtttgggtttcacc
tattttgttctggcagtgatgcagaccttttctccccaaagagagattcccttgatgaag
cataattggtggaaccccattcaagatgtggttttatactggcctcaatggctcatcatt
gtgttgctggagaccatgtggctgtgtctcactttcttactacctgttccaaattgcccc
accggatatttaggagctggtggtatcggagatgatggtttataccccaattgcactgga
ggagcagccgcgtatatagaccggtggttatttagagacaatatcttctggtatccaaca
tgcaaggtcttgtatcacacaacagagcccttcgatccagagggtgttctgggtactatc
aattccattgttatgggattctttggcatgcaggctggaaagattcttctgttttttcgt
aaaatgaataaaggtatcctgacacgattcctgatttgggccctcatcctgggaatctct
gcagccatcctttctaagtgcacaagagacgaaggatttatacctgtcaataaaaacctt
tggtccctgtcatttgtgacctgcatggggtgcttgtcctttttgctgctggctgtgatg
tattttgtcatggacattaaggaatggtggggcggccaacctttcatttatcccgggatg
aactccatatttgtgtatgttggccactctctgctgggcttttacttccccttcagctgg
gagatgcatttccaggacagtcactgggagaagcttttccagaacatatggggttcactt
ggactgtattttcctcaaaggatgtacacagagagcatctacgtgggtcagccgcaggga
tcaccagtgcttcaggttcattcaatgctggaaagcaatacagagaggccctatttcttc
ctgtgctcccacagagacacttatgcatcatggtttcacatggatgaggcatctgggatc
ctttcaatgaacaaaaccctggagtggagcgacttcagtagtatacgtagcagctcgggc
aggcccaataaggatctcaacctgaaggtcggagtctcgtcagtgcccctgcagaaagcg
atgtgcatgttccttcccacagtggaggtcaaactggtgttcattaatgacacagcgccc
tcctgtggtcaggttgatctgagcaaattgtgctaccctgataaggtttcaaacccccac
atcacagagaaccgtatgccaggggcctttcggcagcttcgccgctttacacacatgagc
atttgccccaactacaccatcagttatggagtggaagcagaatctccagttccatttgcg
gtcgacagctccacttcagaactggtggtcactgcacctgtggaccgtgaggagaaggaa
atgtaccatctggatattgtgtgtatggtacagacagaagaaaagctgtggaagtacttt
acttctctgcacttaaacatctatgatgaggatgataatcctccttacgtgaatgggact
gacagtgaggacgtcataatagaatttaaccgcagcgagggtactgtctatggaactctg
tttgtatatgacagggacacaacgcctgtttatcccacaaaccaaattcaaaacaaattg
gtgggcaccttaatgacgaatgactcctggatcagaaacacttttactatagaacacaaa
tttagggaagaaaaggccatttttggcaatgtccgtgggacggttcatgaatacaagcta
aaactcagtcagaatctgtctgtgacggagcaacgttcatttcagttggactacctggtc
aatgacaccacttttccgggccccgagggaacagtgctgttacatttcaatgtgactatc
ctgccggttcctattcgcttctccaatatcacctacttcttcactgtctcaaagaaagca
actacatactcccagattggagaagtatgtgtggacaactgtctgaagtttaagggcatt
gatgtcacatatcagttagagatcgctgagaggaacatctctgctgatgctcagtcgtgt
tacatggcagttagccttgcacagaacccaaatgtaaagaccggtgtgctctatgtgaat
gacactgaggtgttacgcagaccagagtgccaagagctgcagtacgtggttattgctcag
gagcagcggaacaagtttcaggccaagactcagctcgtcatcatttttgagggtgaagca
gatctcatgaggatggatgagctgcgggttttggcttgtgcagagaagagacagcgaggg
gagtgtgaggcgtctcgaggcctgggagcccctacagggagatgccagtggagacaaggc
aaagataaaggaatatctaaaaaatactccacctgttcccctgacctccgtacctgtcca
gatggttactgtgatgccattgagagcaaaaacatatccatatgtcctcaggattgctcc
agtcagcccataattggaggatacgagagggacctgtatggaatcaaagctggacatggg
acctgctactgtttttcaggaaaatgcttctgtgaaaaggatgaatcagaagaagctatt
tgtgatgacatgtgcaagaccgtcattgcaactggtgtcctcctatccttcattgtctcc
attctcctgtcttcatactttatccaccgttatcacaagagcacacctaagccacccatc
gcctcagctgaaatgaccttccgccgaccagcccagtcctacccaatcagttactccgcc
aataacgttcgtcgagcttctctcgattccatggagaatcaagtggccatcgacaccttc
aaaatacccgaagatccaaagtgggagttcccacgaaaaaaccttgtgctgggtaagact
cttggagagggagagtttggaaaggttgtgaaggccacagctttccggctcaaaggaaaa
gctggatacactacagttgctgtaaagatgttgaaagaaaatgcatctcacagtgagctt
cgagacctcctgtcagagttcacattgctcaagcaggttaatcaccctcatgtaataaaa
atgtatggagcttgcagccaggatggtccattacatttaattgttgaatacgccaagtac
ggctcactgcggaacttcctgagagagagccggaaagttggaccaagctacatgagtaat
gatgccaaccgcaactcaagttacttggaaaacccagatgagagagctctgaccatgggt
gacctcatctcctttgcatggcagatctccagaggaatgcaatacctggctgaaatgaag
cttgtgcacagagaccttgctgccaggaatgtgctagtggcagagggaaggaagatgaaa
atatcggactttggtttatctcgagatgtctatgaggaagattcatatgtgaagaggagc
aagggtcgtattcctgtcaaatggatggctatagagtctttgttcgatcacatctacacc
acacaaagcgatgtctggtcttttggtgtcctcttatgggagattgtgactctgggtgga
aacccctacccaggcattgctccggaacgacttttcaaccttctgaagacaggctacagg
atggagaaaccggagaactgcacagatgaaatgtacaatctgatgcttcgttgttggaaa
caagaggcagataagcgccccactttctcagacatcagtaaagaacttgagaagatgatg
gtgaaaagccgagactatctggatctcgcggcttccacaccagcagacgccctgctatat
gacgactccctctctgaagaggacacacccttagtggactgtagtaacgcccctctccct
cgaaccctcccctccacttggattgaaaacaagctctatggcatgtcatacccgaactgg
ccagagaagagcccggtacctctcaacagacttgatgccactaaccctgtctttacaaga
tatgccaatgatagtgtttatgcaaactggatggctttgcattctcccgcaattgtggac
acgctcgatagttaa
DBGET
integrated database retrieval system
