Pimephales promelas (fathead minnow): 120487612
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Entry
120487612 CDS
T08155
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120487612 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120487612 (poln)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120487612 (poln)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
120487612 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
120487612
NCBI-ProteinID:
XP_039539772
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MENYLCSSLNAAPLSAAAQSIIAALQFQYVHRADRSRATLSSRGFRLSQHQGRHDRNQEM
CIRDLELNNLAEDSNHFMLKDETSNESMGSPQARPDVMTKEEIHKLTLGKRRWIQPASPI
EEGPVGCNQHEATPEKKISFSQLTLPTNNCHPASKEECKMIYNVDKQSKNGQIDQLWSCR
SGLTENDKYDSVCEEISKEARADTAVFIQVQHNSFISNGEKPTYKYQDLETSHCRQDNQN
SEWSAPVECCAYAKRCGSIFVFECEQHTPVRPGEILDSGREKEDSDSERREITKSRISSP
KPDENTIPMPVEERAGKMESTVHPTSVGVQHSIQPQSQAGEGKSFPKHIRKWNPPGSVQE
APKITSSHELCDKTLRNPTLCHAKVKGSVQLLKPKAPQSGVKRQRHPLRPQKESKRQECN
KPNNFKLPNPSDPSLSGSKISYQMSSETDIKEDGTTATSRGAFSLISDPRVCDTGRLSQE
DRECMLEEVGKAKALVVTMVYQDGTIQLDPEQRLCPAVCGLLVLLKTDLDSEGLQDRPPE
RVLYLRLEQTPAWAQQDLIQKPDAFTRELLLRMMCGTKLFVCFKAKDLLRTALRHFSRDL
SWKQVLGCQVMDPQIAAWLLDPGNSATCFQTLLSKHYTHPVPPTLEPVLGQAKVTRAISN
LSLLHKLMVELQNKLQTQGLWQLYSGIEQKMIPVLAAMESYKMHVDKEALKKTSEMLGSK
LKQLEQEAHQAAGQKFLVSSSAQLRLILFEKLRLHELCENKKLPKTIKQQQSTSETALLQ
LQKLHPLPKIVLEYRQIHKIKTAFVDGILSCMSKTFISSTWNQTSTVSGRLSAKHPNFQA
LPKQPLQITKKQYIQGKNSDVVTVHPRAMFIPREGWTFLSADFCQVELRLLAHLSADPQL
LRIFQNPEADAFTMLAAQWKGVSKDTVSLEDREHAKRIVYSVVYGAGRERLSSILGGSAE
EASRFQDSFLQTYREVPAFIQLIIQHCHEHGFVKSIMGRRRSLPHIHSADWSLRNQAERQ
AVNFVLQGSAADLAKMAMIKICSQVSSASYTARLVAQIHDELLFEVEISQLEEFAVLVKT
TMESLQHIADLEVNISVPLKVSLATGRSWGSMCEMNLPCTTTATSV
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagaactacctctgcagcagtctgaacgcagctcctctctcagcagctgcacagagc
atcatagcagcccttcagttccagtatgtgcatagagcagacagaagcagagctactttg
agtagtagaggcttcagactgtctcagcatcagggcagacatgacagaaatcaagagatg
tgcatcagagacttggagttaaataatctggcagaagactcaaaccacttcatgttaaag
gatgagaccagtaatgagagcatggggagccctcaggctagaccagacgttatgacaaaa
gaagagatccataaactgaccttgggtaaaaggcggtggattcaaccagcaagccccatt
gaagaaggcccagtaggttgtaatcaacatgaggctaccccagagaagaagatcagcttt
agccagcttacgttgcctactaacaactgtcatccagcatccaaagaagagtgcaaaatg
atttataatgtggacaagcagagtaagaatggacagatagaccaattatggagctgtcga
tctgggttgacagagaacgataagtatgattctgtttgcgaggaaatctcaaaagaggcc
agagctgacacagctgtgtttatacaagtgcagcataatagttttatatctaatggagag
aaaccaacatataagtatcaggatctggagaccagccattgccggcaagataatcaaaac
tctgaatggtcagctccagtggaatgttgtgcatatgccaaaagatgtgggagcatcttt
gtctttgaatgtgagcaacacacacctgttaggccaggtgaaatactggactcagggagg
gagaaagaagacagcgactcagaaagaagagagattactaagagcagaattagttctccc
aagccagatgagaatacaattccgatgcctgttgaagagagagctggaaagatggagtct
acagtacaccccaccagtgttggtgtgcagcacagcatccagccccagtctcaggctggt
gagggaaaatcttttccaaagcatattagaaaatggaatccccctggttccgtacaagaa
gctcctaagatcacttcatcccatgagttgtgtgataagacacttagaaacccgacattg
tgccatgcaaaagtaaagggctcagtgcagctcttaaaaccaaaagctccacagtctggt
gtcaagaggcagagacatcccctcagaccacagaaagaatctaagaggcaagaatgcaat
aaaccgaataactttaaactccccaacccctctgatccaagtctgtcaggatccaaaata
agctatcaaatgtcttcagaaacagatataaaagaagatggaaccacagcaacttctaga
ggggcttttagtttgatttctgatcccagggtgtgtgacacaggccgtctctcacaagag
gatagagaatgtatgttagaggaggttggaaaagcgaaagcattagttgtcaccatggta
taccaagatggcaccatacaactggacccagaacagaggctgtgccctgctgtgtgtggc
ctgctggttttgctgaagactgatttggattcagagggactacaggacaggccaccagag
agggtgctatacctcagactagagcagacaccagcctgggcccaacaagacttgatacaa
aaaccggatgcctttaccagagagctgttgctgcgaatgatgtgtggcacaaagcttttt
gtgtgctttaaagctaaagacctgcttcgcacagcattgagacactttagcagagacctg
agctggaaacaagtgttggggtgtcaagtcatggatcctcagattgctgcgtggctgtta
gatcctggcaactctgctacgtgctttcagaccctgctttccaaacactacacgcatcca
gttccacccacactggaacctgtgcttgggcaagccaaggtgactcgagcgatttcaaat
ttgtctcttctacacaagctaatggtggaattacaaaacaagcttcagactcaggggctg
tggcagctctattctggcatagaacaaaagatgattccagttctggcagcaatggagagc
tataaaatgcacgtggacaaggaggcattgaaaaagacttcagagatgttggggtctaag
ctgaagcagttagagcaggaggctcaccaggctgcaggtcaaaagttcctggtatccagc
agtgctcagctcagactgatcctcttcgagaagctgcgtttacatgaactttgtgagaat
aagaagcttcccaaaacaatcaaacaacagcagtcaacatcagaaacagctctattacaa
ctacagaagctgcatccactgcccaaaatcgtactggaatacagacagattcacaaaatc
aagactgcatttgtggatggcattttgtcttgtatgagcaagacattcatttcttccaca
tggaatcagaccagtacagtgagtggcagactgtctgccaaacatcctaattttcaagct
cttccgaagcagccactgcagatcactaagaaacagtacatccaaggaaagaactctgat
gtagtgactgtgcacccacgtgccatgttcattccacgggagggttggactttcctctct
gcagatttctgtcaggttgagttgcgtctcttggctcacctgtcagctgacccacagtta
ctgagaatctttcagaaccctgaggcagacgcattcactatgctggcggcccaatggaag
ggtgtgagcaaggacacagtgagtttggaggacagagagcatgccaagcgtatcgtctac
tctgtggtttatggagctggaagagaacggttatctagtattctgggtgggagtgcggag
gaggccagccgttttcaggactctttcctacagacgtacagagaggtgccggccttcatt
cagctcatcatccagcactgccacgaacacggatttgtgaagtccataatgggaaggcgc
cgttccctccctcacattcactctgctgactggagccttcgaaaccaagcagagagacag
gccgtcaactttgtactacagggctcagctgcagacctagccaaaatggccatgatcaaa
atctgctctcaagtgtcgtctgcctcttacactgccaggctggtggctcaaatccatgat
gagctgctgtttgaagtggagatctcacaattggaagagtttgctgtgctggtgaagacg
accatggaatctcttcagcacattgcagatttggaagtgaatatctctgtgcccctcaaa
gtctcactggccacaggacggtcatggggctcaatgtgtgagatgaacctcccctgcacc
actacagctacttccgtctga
DBGET
integrated database retrieval system
