Pimephales promelas (fathead minnow): 120494111
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Entry
120494111 CDS
T08155
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120494111 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120494111 (esr1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
120494111 (esr1)
Nuclear receptors [BR:
pprm03310
]
3. Estrogen like
3A. Estrogen receptor
120494111 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
Motif
Other DBs
NCBI-GeneID:
120494111
NCBI-ProteinID:
XP_039549168
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MVMSGGQTSGEAAGTRQRHRTNLNPEREDLEGLSSPPTAHKLSPMYPKEEHSAEGISSSV
NYLDGAYEYPDPTQTYGTTSPAEPLSVGYFLAPTDHHAPPVEEHMQTFSGESSSPLMFAP
TSPQLSPYLSHHGGHHSTHQVSYYLDTSSSTVYRSSVVSSQQAGVGLCEVLCSATDRQEM
YTGSRAAGGFDSEKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQ
CTIDRNRRKSCQACRLRKCYEVGMMKGGIRKDRGGRAIRRERRKSDNEDRDKSYSEQSSR
VGLRTPQDKRKKSSAEVVSALCMPPDQVLVLLLGAEPPAVCSRQKHSPPYTEITMMSLLT
NMADKELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEVLMIGLIWRSIHSPGKLIFAQD
LILDRNEGECVEGMAEIFDMLLATVARLRSLKLKLEEFVCLKAIILLNSGAFSFCSSPVE
PLMDSFMVQCMLDNITDALIYGISKSGASLQLQSRRQAQLLLLLSHIRHMSNKGMEHLYH
MKCKNRVPLYDLLLEMLDAQRFQSPGEVQRLGAQSEKDPPSTPPTRGPGATQPNTGCLSQ
SPDP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtctggagggcagaccagcggagaggctgctggtaccaggcagcgacacagg
accaacctgaacccggagagagaagacctggagggactttcctcaccgcccactgcccac
aaactctcgcctatgtaccccaaggaggagcacagcgcagagggcatcagctcctctgtc
aattaccttgatggagcttatgagtacccagaccccacacagacctatggcaccacgtca
cccgcagagcctctctctgtcggatacttcctggctcctacggaccaccacgcaccccct
gtcgaagaacatatgcagacgttcagcggagaatccagcagccctctcatgtttgcaccc
accagccctcagctgtccccgtacctgagccatcatggaggacaccactcgacccaccag
gtgtcctactacctggacacctcgtctagcacagtctacaggtccagtgtggtgtcttct
cagcaggcaggtgttggtctgtgtgaggtgttgtgcagtgcgactgacaggcaggagatg
tacaccggatcaagagctgcaggaggatttgattcagagaaggagacgcgcttctgtgcg
gtgtgcagtgactatgcttccggctatcattatggagtctggtcctgtgagggatgcaaa
gctttcttcaagagaagcattcagggtcacaatgactatgtttgtccagcaaccaaccag
tgcactattgacagaaaccgcaggaagagctgccaagcatgcagactacgcaagtgttat
gaagtaggcatgatgaaaggaggtattcgtaaagaccgcggtggccgcgctatcaggcgt
gagcggaggaagagcgataatgaggatcgtgataagagctacagtgagcagtcaagccgt
gttggactgaggacacctcaggacaagaggaagaagagcagcgccgaggtggtcagtgct
ttatgcatgccacctgaccaggtgctggtgttgcttctgggtgcagagccaccggctgtc
tgttcacgtcagaagcacagccccccgtacaccgagatcaccatgatgtccctgctcaca
aacatggctgacaaagaactcgtccacatgatcgcctgggctaagaaagtaccagggttc
caggacctctctctgcatgaccaggttcagttgttggagagctcttggctggaggtgttg
atgatcggcctcatatggaggtccattcattcacctggaaaactcatctttgctcaggat
ctcatcctcgataggaatgaaggagaatgtgtcgaggggatggctgagattttcgacatg
cttttggcgactgtggctcgattacggagtctaaaactcaagctggaggaatttgtatgt
cttaaagccatcatacttctcaattctggtgcattttcattctgctccagtccagtggag
cccctgatggacagcttcatggtgcagtgcatgctggacaacatcactgatgccctcata
tacgggatcagcaaatccggtgcctctctgcagctgcagtcccggcgtcaggcgcagctc
ctgctactgctctcccacatcagacacatgagcaacaaaggaatggagcacttatatcat
atgaaatgtaagaatcgagtcccgctgtatgatcttttgctggagatgctggatgcccag
cgattccaatccccaggagaggtgcagcgactgggagcacagagtgagaaagaccccccg
tccacaccacccaccagaggacctggagccacgcagcccaacactggctgtctcagccaa
agtccagacccatga
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