Pimephales promelas (fathead minnow): 120494427 Help Entry 120494427         CDS       T08155                                  Symbol polq Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pprm03400]     120494427 (polq) Enzymes [BR:pprm01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      120494427 (polq) DNA repair and recombination proteins [BR:pprm03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     120494427 (polq) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Motif Other DBs NCBI-GeneID:  120494427 NCBI-ProteinID:  XP_039549506 LinkDB All DBs Position Unknown AA seq 2612 aa AA seqDB search MTTSTTSKIYLGQHRIVKTKGIVLADEKPSNRQSSHLQACSSATDIHEKRRCNEPTNKQW MPGDSTLAMDEDILQAINELGPEVLKFKKDENIQHVTESVSLQKNSELPQNIFEQQVQHA ENISPSSPGSAWSPSERKRTRTQAKKENDWKDLAQKLLFSETKKTEAGGRARGRELKRDG EYYSPQKILNSMKKTSKVANDKQNLKFRRDASPNDSVNTSKDYILFNPTHMASAKERSML QKRSMKNISVSVLTPPPGLDLSVLGDATLPDAAESIHMGRPANQSDKLMLSSWGLPKPVL EKYQSLGVQRMFEWQAECLTLGKVLEGQNLVYSAPTSAGKTLVSELLILKRVLETRRKAM FILPFVSVAREKMFYLQNVFQEAGVRVEGYMGNTSAAGGFSALDVAICTIEKANGLINRL IEEDKLDLLGIVVVDELHMLGDSGRGYLLELLLTKIQYIAQKNAARDSGQSTSPGVQIIG MSATLPNLDLLARWLNAELYSTNYRPVPLMEWVKIGSNVYDGSLNLVRQFTPALPVKGDD DHIVSLCFETVRDGHSALLFCPSKNWCEKLADTIGREFYNLHHKEMQSGSGVQSICLKQE GLQDVVAQLKRSPAGLDQVLQRTVPWGVAFHHAGLTFDERDILEGAFRQGYIRVLAATST LSSGVNLPARRVIIRTPVFNGHLLDILTYKQMVGRAGRKGVDTMGESVLVCKEAERAKGT SLIQGSLRPISSCLVKQEGEGVTTSMLRAILEIIVGGVASSPQDVRMYASCTLLAASMAT EQQHQEGAESETRSKGAIEACIEWLMDNEFINVQKEGDVERYCPTHLGSATLSSSLSPPE ALGIFADLQRAMKGFVLENDLHILYQITPVYVDWTTIDWYQFFCLWEQLPSAMKRVAEMV GIQEGFLARSVSGKLIAKTEKQRRQMAIHKRFFTTLVLLDLVSEEPLGAVAKKYGCSRGQ LQSLQQSASTYAGMVTVFCNRLGWHNLELLLSQFQSRLSFGVQRELCDLVRISLLNASRA RTLYSSGLVTVAELARADVTEVEKALRKAIPFKSSRHAVDESEVEAQERKNMRCIWVSGK KALTEREAAQQIVAEARLLLQQDLALLGVEWNPASLSTKIQPDSHSPEKSSNKKPLQSMS RDPEHVENVNPNGAEQMVVDKSADISFHPLLRPLEFTTSSGKTMDIGVSSVECQPAKNCE QQSSVLHKVLKSINAKDKGCQNNQTAESSDSSSELLQRSSGHNSCLKSTCIAGNDEHCVS PVSKRRKMNVTDAEATPTVNGAKTATQIAKNPKLMSKAEELCSYKHETDCRIDKDKMKLQ SSIVELNQDIESKIQQDGEATNVNVFTSGRGKKCTSKTKHLNESTLEVYHETQHEKRETV THSFRKVNHAIENEDGSQVNTKVKKDLACHSEKLSSPDLYTNGLEEFGDSFQLDTQIEKM LQGDHFSHGNCNLNILKENKQDNYVVLANKMKVISQSSFLESENHASKNRNKDPVECLSS YENGPSTEGKPKYNISLTDSQLEKILNYSNQAAEDESCVNKPADQGENHESSDHITDSSF NRSSSFLFDSLYDNSILDAMEEAAMDRENKEEQVIEAHLNSNGSSPELIPERRDVVSEDQ EAIQWGESSFNLSEWGDSLLIGEQYLEKMNNIVKACDGPRLGAENPSYTDDIVSELHVSQ NNEPHPKVSSERRQLNHSSFHISPGMQDIFDKWSDQFSTLSEPLGQSNSTVVKANAAAVL VEKACSLITNHEIEQRGLRSIRTEDVVQIQAKPVTQNDPVPPTPVSEPVTPWVKMTTTAV QSPLNVTKNRSGLDTNSKPNTQKDNQSCLRRNSASELDTCQAEDGFTRLSQCPPFPTSNS CSPETFSIIDVASDRRLFQTFVEEWKTKDRFSLAVACEKIDRTPMQPETVIGGKFKKPTT PMRNKRKDGFLLKGHEDLVVVGMSVCWGAKDAYFVSLQQELSGTDISASLAPPPLDETLT VEERLKQIHCCLEKESSVMITYDFIQLYKTLLLACELAMRGTFEDPKIACWLLDSSSKER TLHNMVSSFATEDLPMLEAISPGQSVQSLGIYGDPSHPGRYRAAVESVLVFRVMTQLNCL LEKDGFLDSFKKVEMPTQYCLALLELNGMGFSVAECEAQKHVMQAKLSVLESQAYQLAGH SFSLTSPEDVAEVLFLELKLPPNGDLNAPKNKKTLGYTRRPGARIKLSKQFSTTKDVLEK LKPLHQLPGVILEWRRITNALTKVVFPLQREKKWHPHLKMDRIHPVSQSHTATGRVSFTE PNIQNVPKDFEIQMPTLIEESQPSQNNGASKMWGKRSKTNQLLAPLLKVPDKSPDKGMPF SVSMRHAFVPFSGGLILAADYSQLELRILAHLSRDRRLLHVLNSGADVFKSIAAEWKMVE PASVDDNMRQEAKQICYGIIYGMGAKSLGEQMGIEENDAACYIETFKSRYTGIQNFLRET VQKCGKNGYVKTLLGRKRFLPGIKDSNVYIKSHSERQAVNTTVQGSAADIVKLATINIQR RLEAAFPGMPTSHQHPPVKMGGRHRNQFRPPRGGYFILQLHDELIYEVAEEDVIQVAQIM KREMECVVKLYVKLRVKVKVGPSWGNLQDLDI NT seq 7839 nt NT seq  +upstreamnt  +downstreamnt atgactacatcaacgacaagtaagatctatttgggacagcatcggattgtaaagactaaa ggcatagttcttgcagatgagaaaccatcgaatagacaatcaagtcacctgcaggcatgt tcctctgcaacagacatacatgagaagagaagatgtaatgagccaactaataagcaatgg atgccaggagactccactctggctatggatgaggacattttacaagccattaatgaactg ggtccagaagtcttgaaattcaagaaagatgaaaatattcaacatgtaactgaatctgta tcacttcagaaaaactctgagttgccacaaaatatatttgagcagcaagtacaacatgca gaaaatatcagcccttcaagtccagggtcagcgtggtcaccatcagagcgcaaaagaacc agaacacaagccaaaaaagagaatgattggaaggatttggctcaaaagcttttgttcagt gaaaccaaaaagactgaagcaggagggcgggcccgtggccgtgagttgaaacgtgacggg gaatattattcccctcaaaagatcctgaactccatgaaaaaaacatctaaagtagcaaat gacaagcaaaatttaaagttcagaagagatgccagcccaaatgactctgtcaatacctcc aaggattacattttgttcaatccgacacatatggcttctgctaaagagcgatccatgttg cagaagaggtcaatgaaaaacatttcagtctctgtgctgacccctcctcctggactggat cttagtgtcctcggtgatgctacacttccagatgcagctgaaagcatccatatgggacgc cctgctaatcagtcagacaagcttatgctctcaagttggggtctccctaagcctgttctg gaaaagtaccagagtctgggcgttcagaggatgtttgagtggcaggctgagtgtctgacc ttgggcaaagtcttggagggccaaaacctggtgtattctgctccaaccagtgcagggaaa actttggtttctgagttgttaatcttgaaaagagttttggaaacaagacggaaggccatg ttcattcttcctttcgtgtctgtggcgcgagagaagatgttttatctacagaatgtattt caggaggcaggggtcagagtggaggggtatatgggcaacacttcagcagctggtgggttt tcagcactggatgtcgctatttgcacaatagagaaagctaatggactcatcaacaggctc attgaagaagacaaattggatctacttggaattgttgtggtcgatgagctgcacatgctt ggggactctggtcgtggatatctgttagaacttttgctgacgaaaatccaatacattgcc caaaaaaacgcagcaagggactctggtcaaagtacttctcctggtgtccaaattattggt atgagtgccacactgccaaacttggaccttcttgcccgctggttgaatgctgagctgtat agtactaactatcgccctgtgccattgatggagtgggtcaagatcggctcaaatgtctat gacggatctctgaaccttgtcagacagttcaccccagctcttccagttaagggagatgat gaccacattgttagcctctgctttgaaacagtgcgggacggacactctgcactgctcttc tgcccttcaaaaaactggtgtgagaaactagcagataccattggaagagagttttacaat cttcatcacaaagaaatgcagtcaggctctggagtgcaaagtatatgtctgaagcaggaa ggtcttcaggatgtagtagcgcaactcaagcgcagtcctgcaggcttagaccaggtcctt cagcggactgttccctggggggtggccttccaccatgcaggattgacattcgatgagcgg gatattctagaaggagcttttcgtcaaggctacattagggtgttagcggccacctccaca ttgtcgtctggtgtgaatctgcccgctcgacgtgtgattatcagaactcctgttttcaat ggtcatttgctggacatcctgacctataagcagatggtgggacgggctggccgtaaagga gtggacaccatgggtgagagtgtgttggtctgtaaagaggctgaacgtgcaaaggggacg agccttatccagggctctctcaggcctatcagcagctgcctggtgaagcaagagggagag ggcgtcactaccagcatgctcagggccatcctggagatcatcgttggaggagttgccagc tcaccacaggatgtgaggatgtatgcttcctgcactctgctggcagccagcatggcaacc gaacagcaacatcaggaaggagctgaatcagaaactcgaagcaaaggggctattgaggcc tgcatagagtggctgatggacaatgagttcataaatgtacagaaggagggagatgtggag aggtactgccccacgcatctgggttctgcgactctatcctcatctttatcacccccagaa gccctgggaatttttgcagatcttcagagagcaatgaaagggtttgtgttggaaaatgat ctccatatactctaccagataacacctgtgtatgtggactggacgacaatagactggtac cagttcttctgtttgtgggagcaactaccttctgcaatgaagcgggtggctgagatggtg ggcattcaagaaggtttcctggcccgttctgttagtggaaaattaattgctaaaacagag aagcaacgaagacagatggccattcacaaacgttttttcacaacattagttctccttgac ctggtaagcgaagaaccacttggagctgtcgcaaagaagtatggctgtagccgaggacag cttcagtcacttcagcagtctgcctcaacatatgcaggtatggttacggtcttctgtaac cgactcggatggcacaacctagagttgcttctgtcccagttccagagtcgtctgagtttt ggagtccagagggagttgtgtgatctggttcgtatttctttattaaacgcctcgagggca cgtacactctacagctctggacttgtcactgtggcagagttggccagagctgatgttaca gaggtggagaaggccctcagaaaagctatccctttcaaaagctccaggcatgcggtggat gagagcgaggtggaggctcaagaacgcaagaacatgcgctgcatctgggtcagtgggaaa aaagccttgactgaaagggaagctgctcagcagatcgtggctgaggcccgtctgctcctc cagcaggatttggctcttcttggggtggaatggaacccagcttccctctcaacaaagatc cagccagattcccattcccctgaaaaatcttccaacaaaaaacctctacagtccatgtca agagacccagaacatgtagaaaatgtaaatccgaatggggccgaacagatggtggtggat aaaagtgctgacattagtttccatcctcttttgcggccattagagttcactaccagttca ggaaaaacaatggatattggtgtatcatctgtcgagtgtcagcctgctaagaattgtgaa cagcaatcaagtgtactgcataaagttctcaaatcaataaatgccaaagataagggctgt cagaataatcagacagctgagtcatcggatagttcttcagaattacttcaaaggagctcc ggacataattcctgtctaaaaagtacctgcatcgctggcaatgacgaacattgtgtaagt cctgtttcaaaacgcagaaagatgaacgttacagatgctgaagcaacacccacagtcaat ggagcaaaaacggcaactcagattgcaaaaaaccctaaactaatgtcaaaagctgaagag ctttgctcttataaacatgaaacagactgtagaatagataaagacaaaatgaaactccag tcttcaattgttgaactgaaccaagacattgagtcaaaaatacaacaggatggggaagcc acaaatgtcaatgtattcacctcaggtaggggcaagaagtgcacatctaaaacaaaacat ttaaatgagagtaccctagaggtttaccatgaaactcaacatgaaaagcgagaaacggtt actcacagtttcaggaaagtcaaccacgcaattgagaatgaagatggctcacaagtgaac accaaagttaaaaaggatttagcctgtcattctgaaaagctcagctcccctgacttgtac acaaatggattggaagagtttggggatagttttcaactcgatactcagattgagaaaatg cttcaaggggatcatttttcacacggcaattgtaatttaaacattctcaaagaaaataaa caggacaattatgttgttttagcaaataagatgaaagtaatcagtcagtcatctttcctt gaaagtgagaatcatgcatctaaaaaccgaaacaaagacccagttgaatgtttatcatct tatgagaatggcccatccactgaaggcaaaccaaaatataacatctcacttactgacagc cagttggagaaaattttaaattacagtaaccaagctgctgaagacgaatcatgtgtaaat aaacccgctgaccaaggggaaaatcatgagtcctctgatcatattactgacagtagcttc aaccggagcagcagctttctgtttgacagtctctatgacaactccatcttggacgccatg gaggaggcagcaatggatcgagaaaacaaggaagagcaggtgattgaagcacatttaaat tcaaatggctcttctccagaactcattccagagaggagagatgttgtgtcagaggatcag gaagcaatccaatggggcgaatcatctttcaacctttctgaatggggagattcactactt attggggagcagtatcttgagaaaatgaacaatattgtcaaggcttgtgatgggccaaga ttgggtgcagagaaccccagctatacagatgacattgtgtctgaactacatgtatcacaa aacaatgagcctcatccaaaagtttcttctgaaagacgacaattaaaccactcatcattt cacattagccctggaatgcaggacatatttgataaatggtctgatcagttttcaacctta tctgagcctctagggcagtcaaattcaactgtggtgaaagcaaatgcagctgctgttctt gtcgaaaaagcttgttccctaataacgaaccatgagattgagcagcgaggtctaagaagc ataagaactgaagatgttgtgcaaatccaggccaaaccagtgacacagaatgaccctgtt cctcccacaccagtttctgaaccagtaacaccatgggtcaaaatgaccaccacagctgta caatcacctcttaatgtcaccaagaacaggtccggactggatacaaattctaagcccaat acccagaaagataatcaatcttgtttgaggagaaactcagcatcagagttagacacgtgt caggctgaggacggctttacaagactttctcagtgtccaccattccctacttctaactcc tgcagtccagaaacattttccataatcgatgtggcaagcgatagaaggcttttccaaaca tttgtagaggagtggaaaacaaaggacagattttctcttgctgttgcctgtgagaagata gacagaaccccaatgcaacctgagacagttattggtggaaaattcaaaaaacctaccacc ccaatgaggaacaaaagaaaagatggcttccttctgaaaggacatgaggatcttgttgtc gttggcatgtctgtatgctggggcgcaaaagatgcttattttgtatctctacaacaggag ctgtcaggcacagatataagtgccagtttagctccaccgcctcttgatgagactcttaca gttgaggagcgactgaagcaaattcattgctgcttggaaaaagaatcaagtgtgatgatc acttatgactttattcaactttacaagacacttctcctggcgtgtgagcttgctatgcgt ggcacatttgaagacccaaagattgcatgttggcttctggattcaagctccaaagagcgc actctccacaacatggtgtccagcttcgctactgaggatctcccgatgttggaagcaatt agtcctggtcagagtgtgcagagtttagggatctatggagatcccagtcacccaggacgt tatagagctgctgttgagtctgttttggttttcagggtcatgacgcaactcaactgtctt ctcgaaaaggatggtttcttggattcattcaagaaagtggagatgcccacccaatactgc ctggcattgttggagctgaatggaatggggtttagtgttgctgaatgtgaggctcagaaa catgtgatgcaagccaagctaagtgttcttgaatcccaagcctatcagcttgcaggacat agcttctcactgaccagtccagaggatgttgcggaggtgttgtttcttgagttgaagctt cctcccaatggagatttaaatgctccaaagaataagaagacactgggctacactagaaga ccgggtgcccgtatcaaactttctaaacagttcagtacaaccaaggatgttttagaaaag ctcaagccattgcatcagttgccaggtgttattcttgagtggaggaggatcacgaatgct ttgacaaaagtagttttccccttgcaaagagagaagaagtggcacccacatctgaagatg gacagaattcatccagtctcacagtcacacactgccacaggtcgtgtgagcttcactgaa ccaaacattcagaatgtcccaaaagattttgaaattcagatgccaacacttatagaagaa agtcaaccatcacagaataatggtgcaagcaagatgtgggggaaacgatcaaagacaaac cagctattggcaccacttttaaaagtacctgacaaatcaccagataaagggatgccattt tctgtcagcatgagacatgcttttgttcccttctcaggaggtctgattctggctgctgac tactcacagttggagcttcgcatcttggctcacctatcccgagacagacggctcctccat gtgcttaacagtggtgcagatgtgtttaaaagcatagcagctgagtggaaaatggtggag cctgcttcggttgatgataacatgaggcaagaggccaaacagatttgttatggaataatc tatggcatgggagccaagtcacttggagagcaaatgggcattgaggagaatgatgctgcc tgttacattgagacatttaaatccagatacaccggcatacagaactttcttcgtgaaact gtgcagaagtgtgggaaaaatggttacgtgaagacattactcggaaggaagcgtttcttg cctggaataaaggactcgaatgtgtacataaagtctcactcagagcgacaggcagtgaac acgaccgtgcagggctctgccgctgacattgtgaaattagcaaccatcaacatccagcgc agactggaagcagcgtttcctggaatgcctacatcacatcagcaccctccagttaaaatg ggtggtagacacagaaatcagttcagaccacctcgaggaggctattttatacttcagctg catgatgaacttatttatgaggttgcagaggaagacgtcattcaggttgctcagattatg aagcgagaaatggaatgtgttgtaaaattatatgtaaagcttagagtaaaagtcaaagtg ggtccaagctggggtaaccttcaagacctggacatataa

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