Pseudomonas protegens Cab57: PPC_0400
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Entry
PPC_0400 CDS
T03613
Name
(GenBank) thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00730
Thiamine metabolism
ppro01100
Metabolic pathways
ppro01240
Biosynthesis of cofactors
ppro04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PPC_0400
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PPC_0400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_0400
Enzymes [BR:
ppro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PPC_0400
Transfer RNA biogenesis [BR:
ppro03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPC_0400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
BAO59747
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Position
440923..442377
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETAVSEPK
ALKDMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEALPGKVFAVRCKRAGKHE
FSSMDVEKYVGSQLRRQCGAAGISLKEPEIEVRMEIRDQRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMGHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTL
PNLSVIDCVTEKLVLRPLIASHKQDIIDLAVEIGTADFAKHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDVQIEEVSEALAGQIVIDIRHPDAE
EDQPLELAGIEVKALPFYALNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagttttcccggaaatcaccatcaagagccgcccggttcggacg
cgtttcatccgtcagttggcgaagaacatccgtgccgtgctccgcgacctggacccggcc
gtggtggtcaatggtgtgtgggacaacctcgagctggaaaccgccgtcagcgagcccaag
gccctgaaggacatgaccgagcgcctgagctgcatgcccggcatcgcgcatttcctgcag
gtcgacgagtaccctctgggcgacttcgacgacatcgtcgccaagtgcaagcagcacttt
ggcgaagccctcccggggaaggtttttgccgtgcgctgcaagcgtgccggcaagcatgaa
ttcagctccatggacgtggaaaagtacgtcggcagccaactgcgtcggcagtgcggcgcc
gccggaatttccctgaaagagcctgaaatcgaagtgcggatggaaattcgcgaccaacgg
ttgttcgtgatccacagccagcacaacggcatcggcggctacccgctgggcgccctggaa
cagaccctggtgctgatgtccggcggtttcgattccaccgtcgcggcctaccagatcatg
cgccgcggcctgatggggcatttctgcttcttcaacctgggcgggcgtgcccatgaactg
ggcgtgatggaagtcgcgcactatatatggaagaagtacggcagctcccagcgcgtgctg
ttcgtcagcgtgccgttcgaggaagtgctcggggaaatcctcggcaaagtcgacaacagt
catatgggcgtcattttgaagcgtatgatgttgcgtgccgcgtcgagcatcgccgaccgc
ctgcacatcgatgcgctggtgaccggcgaggcgatttcccaggtgtccagccagaccctg
ccgaacctgtcggtgatcgactgcgtgaccgagaaactggtactgcgccccctgatcgcc
agccacaagcaggacatcatcgacctggccgtggagatcggcacggccgacttcgccaag
cacatgccggagtactgcggggtcatttcggtgaaccccaagacccatgccaagcgccat
cgcgtcgagcatgaagagaaagaattcgatatggcggtgctcgagcgtgcgatcgagcgg
gccaaactggtgccgatcgatcgggtgatcgacgagttgggccaggatgtacagattgaa
gaagtcagtgaggcgctggccggtcagatcgtcatcgacatccgtcatccggatgccgag
gaagaccagccgctggagctcgcaggcatcgaagtaaaagcgctgccgttctatgcattg
aacgcccgcttcaaggaactggaccctacgcgccagtacctgctgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatctgctcagtgagggacatgccaatgtgcgcgtt
tatagaccgagctaa
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