Pseudomonas protegens Cab57: PPC_2997
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Entry
PPC_2997 CDS
T03613
Symbol
hsdM
Name
(GenBank) type I restriction-modification system, M subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppro02048
]
PPC_2997 (hsdM)
Enzymes [BR:
ppro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
PPC_2997 (hsdM)
Prokaryotic defense system [BR:
ppro02048
]
Restriction and modification system (R-M system)
Type I R-M system
PPC_2997 (hsdM)
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Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
UPF0020
HsdM_N
Eco57I
MmeI_Mtase
Motif
Other DBs
NCBI-ProteinID:
BAO62344
LinkDB
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Position
complement(3312149..3313891)
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AA seq
580 aa
AA seq
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MLPLEIKNKVASLWDLVSGAGLASSPYVALEQIACLIFLKHLDGIASADNEDGRSSVFQR
LIPDEIAPPNKHRSFWKALLLHPDPGTYLNDQIFPWLRSLEMRIGNYSSLAERLGLNGML
SDAYFQLDPSKSQALTGLVHAIDELFPYPGQERQEGFLSGEVFEYLFTQGSTSSNIGPLV
TARHITRFMVALLDPRPGHRIIDPAAGTAGFLVSAQQYMLSRHARLRAATQKKIHDGHSL
VGIDLSHSLARIGWVNLLLHDIESPQCMQGNSLIIGGSQGAAEPWLNERYDFVLSDLPFG
GRIDPQEAAGANYLPFYARDDQGKRSDKVEQLFVWRALNLLQVGGSAALIIPQNLLVGRS
QAQIDLRRELLSRHSVEAVILLPGAIFNPYTGIKAAILVVRKVADHQALATPHVAPPQTD
AVWFYEVTQDGHSMDHKRKELPADADNDLFDAFVHFRRRQLSAELWERGRDLYFQAGAEE
GPYWTSLHNVIERSSTQVKQWLVPVRRKLRGSEALFPDSLDPDCIEAKDWSLDIDDYKVI
EQPKSAGENTALQLIDELEQLELKVIEQLRQLRDEIGEVQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctcttgagatcaaaaataaagttgcctcgctctgggacctggtttccggggcc
ggattggcctcctcgccctacgtggcgctggaacagattgcctgcctgatatttctcaag
cacctggatggcattgcctctgcggacaatgaagatggacggtcgtcggtcttccaacgg
ctcatacctgatgagatagctcccccgaacaagcaccgctcgttctggaaagccttgctg
ctgcacccagaccctggcacttacttgaatgaccagatttttccgtggctacgcagcctg
gaaatgcgaatcggcaactactcatcactggccgagcgtctgggtttgaatggcatgctg
agtgacgcctactttcagctcgacccgagcaaaagccaggctctcacgggcttggtgcac
gccattgacgagctattcccctaccctgggcaggagcgccaggaagggtttttatccggg
gaagtgttcgagtatctgtttacccaaggctcgaccagcagcaacatcggccctcttgta
accgcgcgacatatcacccggttcatggtagccctgctggatcccaggcccggacaccgg
attatcgacccggctgccggcaccgccggttttttggtaagtgcccagcaatacatgctg
tccaggcatgccaggctaagggccgccacccaaaaaaagatccatgacggccattccctg
gtgggcatcgacctcagccactccctggctcggattggctgggtcaatcttctgctgcat
gacatcgagtcgccacagtgcatgcaaggcaacagcctgatcatcggtggctctcaaggg
gcggcggagccctggttgaacgagcgttacgactttgtcctgagcgacctgccatttggc
ggccggatcgacccgcaggaagctgctggcgcgaactacttgcccttttacgccagggac
gatcagggcaagcgttccgataaggttgagcagctgtttgtctggcgcgccttgaacctg
ttgcaggttggcggcagcgcggcgctgatcattcctcagaacctgttggttggccgttcg
caagcccagatcgacctgcgccgcgaactgctttccaggcattcagtggaagccgtgatt
ctattgccgggagcgattttcaatccttacaccgggatcaaggcggcaatactggtggtg
cgcaaggtggccgaccatcaagcgctggccacgccacacgttgcaccaccacaaactgac
gctgtctggttttatgaggtgactcaggatgggcactcgatggaccacaagcgcaaggag
ctgcccgctgacgcggacaatgacttgttcgatgccttcgtgcatttccgaagacgtcaa
ctgagtgcagagctctgggagcgcggaagggatctatatttccaggccggtgccgaagaa
ggtccttattggacgtccctccataacgtaatcgagcgcagcagcacccaggtcaaacag
tggctggttcctgtacgtcgcaagttaagaggttccgaagctctatttcccgattcgctg
gacccggactgcatcgaggccaaggactggagcctggacattgatgattacaaggtcatt
gaacaacccaaatccgccggtgagaacacagccttgcagttgatcgatgagctagagcag
ttggaactcaaagtcattgaacaactgcgccagttgcgagacgagatcggagaggtgcaa
tga
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