Paroceanicella profunda: FDP22_21200
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Entry
FDP22_21200 CDS
T06319
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00240
Pyrimidine metabolism
ppru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FDP22_21200
Enzymes [BR:
ppru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
FDP22_21200
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QDL94392
UniProt:
A0A5B8G525
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All DBs
Position
pD4M1B:complement(107930..108868)
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AA seq
312 aa
AA seq
DB search
MASVSPAPLTPDLGEEVAAALSAGRAVVALESTIITHGMPWPQNLETAQAVEAVVRAAGA
VPATIALIEGRLKAGLSPDALAALARADSAVKASGRDLAALMVRKATAGTTVSATMRVAA
LAGIGVFATGGIGGVHRGAEHTFDISADLGELGATPVAVVCAGVKSILDIPKTLEYLETA
RVPVIAYGTDAFPAFFSRESGAHADHRLDSPAEIAAAIALHGRMGSGTGLLIANPVPEAD
ALEPEYIDTIIARAVGEAAAQGIVGRAVTPFLLARINEVSGGRSLAANISLVRNNARLAA
EIAVAGETLRAG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtttcccccgcgccgctcacgcccgatctcggagaggaggtcgccgccgcg
ctctccgcgggtcgcgccgtcgtcgccctcgaatccacgatcatcacccacggcatgccc
tggccgcagaacctggagacggcgcaggcggtcgaggccgtcgtgcgcgcggcgggggcg
gttccggccaccatcgcgctgatcgaggggcggctgaaggccgggctttcccccgacgcg
ctggccgccctcgcgcgcgccgacagtgcggtgaaagcctcggggcgcgacctcgcggcc
ctgatggtgcgcaaggccaccgccggcaccacggtttcggccaccatgcgtgtggcagca
ctggcgggtatcggcgttttcgccaccggcggcatcggcggcgtgcaccgcggggcggag
cacacgttcgacatttcggccgatctcggcgagctgggagcgaccccggtcgcggtggtc
tgcgcaggggtgaagtcgatcctcgatatccccaagacactggaatatctcgaaaccgcg
cgggtgccggtgatcgcctacggcaccgatgcctttcccgccttcttcagccgcgagagc
ggtgcgcacgcggatcatcggctcgacagcccggcggagatcgccgcggcgatcgccctg
catgggcgcatgggctccggcaccgggctgctcatcgccaatcccgtgcccgaggccgac
gcgctggagccggagtacatcgacacgatcatcgcccgggcggtgggcgaagccgccgcg
cagggcatcgtgggcagggcggtcacgccatttctcctcgcgcggatcaacgaagtctcc
ggcgggcgaagcctggccgcgaacatcagcctcgtgcgcaacaatgcccggctcgccgcc
gaaatcgccgttgccggtgagacgctgcgcgcaggctga
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