Pan paniscus (bonobo): 100994100
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Entry
100994100 CDS
T02283
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100994100 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100994100 (CLP1)
Enzymes [BR:
pps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100994100 (CLP1)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100994100 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
100994100
NCBI-ProteinID:
XP_003826469
Ensembl:
ENSPPAG00000041519
UniProt:
A0A2R9C6Y6
LinkDB
All DBs
Position
11:52898181..52902656
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AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaggctaatgatgacaagaagccaaccactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagttgttgactggc
atggcagagatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggctgttctgtgcaactgagcggccgcacggag
gtggcttatgtctccaaggacactcctatgttgctttacctcaacactcacacagccttg
gaacagatgcggaggcaagcggaaaaggaagaagagcgaggtccccgagtgatggtagtg
ggccccactgatgtgggcaagtctacagtgtgtcgccttctgctcaactatgcagtgcgt
ttgggccgccgtcccacttatgtggagctggatgtgggccagggttctgtgtccatccct
ggtaccatgggggccctctacatcgagcggcctgcagacgtcgaagagggtttctctatc
caggcccctctggtgtatcattttggttccaccactcctggcactaacatcaagctttat
aataagattacatctcgtttagcagatgtgttcaaccaaaggtgtgaggtgaaccgaagg
gcatctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccag
gctctggtgcatgcagcctcagcttttgaggtggatgtcgttgttgttctggatcaagaa
cgactgtacaatgaactgaaacgggacctcccccactttgtacgcactgtgctgctccct
aaatctgggggtgtggtggagcgctccaaggacttccggcgggaatgtagggatgagcgt
atccgtgagtatttttatggattccgaggctgtttctatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttacct
ttgggcatgtctcaagaggataatcagctcaagctagtacctgtcactcctgggcgagat
atggtgcaccacctactgagtgttagcactgccgagggtacagaggagaacctgtccgag
acaagtgtagctggcttcattgtggtgaccagtgtggacctggagcatcaggtgtttact
gttctgtctccagccccccgcccgctgcctaagaacttccttctcatcatggatatccgg
ttcatggatctgaagtag
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