KEGG   Podospora pseudocomata: QC762_309390
Entry
QC762_309390      CDS       T09797                                 
Symbol
rpb3
Name
(RefSeq) RNA polymerase II subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03020  RNA polymerase
ppsd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    QC762_309390 (rpb3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    QC762_309390 (rpb3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsd03021]
    QC762_309390 (rpb3)
   03400 DNA repair and recombination proteins [BR:ppsd03400]
    QC762_309390 (rpb3)
Transcription machinery [BR:ppsd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     QC762_309390 (rpb3)
DNA repair and recombination proteins [BR:ppsd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      QC762_309390 (rpb3)
Motif
Pfam: RNA_pol_A_bac RNA_pol_L PriA_CRR
Other DBs
NCBI-GeneID: 87909143
NCBI-ProteinID: XP_062745195
LinkDB
Position
3:complement(3308567..3310662)
AA seq 334 aa
MDYDPMAMDDAESLGPVVKISQADSVRVKFELQNADISFANSLRRVMLAEIPTIAIDLVE
IESNSSVLADEFIAHRLGLIPLNAEGVEHLLYSRDCDCEEYCENCSVKLTLHAKCTGYEN
MSVSARDLVPVGERINQSLGTPVINDKDGTGSLILKLRPEQEIKLECIAKKGIAKEHAKW
APSAAIGFEYDPHNKLRHLDLWYEKDPKSEWPPSEYAKWEEPPVEGEPFDFDAVPNHFYY
NVETAGNLPPDGIVTEGIKVIQQKLAGLIHELTEGEGEGGYDGPRSPDYNSGPDTGYGYS
TSYGGNGGNQSAWGGGGGTTPFGGQTSYGGGGWS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggattacgatccgatggcaatggatgacgccgagtcgctcgggcccgttgtcaagatc
tcgcaggccgactcggtccgcgtcaagttcgaactccagaatgccgacatctcgttcgcc
aactcgctgcgccgcgttatgctggccgagatcccaaccatcgccatcgacttggtcgag
attgaaagcaacagctcggttcttgctgacgaattcatcgcccaccgtcttggtcttatc
ccactcaacgccgagggtgtcgagcaccttctctattcccgcgactgcgactgtgaagag
tactgcgaaaactgcagcgtcaagctcacgctccatgccaagtgcactggctacgagaac
atgtcggtatccgcgcgcgatttggtacctgttggcgagcgcataaatcaatctctgggc
acgccagttattaacgacaaggacggcaccggatcgctcattctcaagctgcgccccgag
caggagatcaagctcgagtgtatcgcgaagaagggcattgcgaaggagcatgcgaagtgg
gcaccaagcgcagccatcgggtttgaatatgacccccacaacaagctccgccatcttgac
ctttggtatgagaaggatcccaagtcggaatggcctcctagcgagtatgccaagtgggaa
gagccaccagtggaaggcgagcctttcgactttgacgccgtccccaaccacttttactac
aacgtcgagacagccggtaaccttccaccagacggaatcgtcaccgagggcatcaaggtc
atccagcaaaagctcgctggtctgattcacgagttgactgaaggggagggtgaaggtggc
tatgacggaccccgcagcccagattacaacagcggtcctgacaccggctatgggtactcg
acatcctatggcggaaatggcgggaaccagagcgcctggggtggcggcggcggaaccact
ccattcggcgggcagacttcctatggcggtggcggttggtcttga

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