Pseudomonas pseudoalcaligenes: BN5_3172
Help
Entry
BN5_3172 CDS
T03772
Symbol
hsdM1
Name
(GenBank) type I restriction-modification system DNA methylase
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppse02048
]
BN5_3172 (hsdM1)
Enzymes [BR:
ppse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
BN5_3172 (hsdM1)
Prokaryotic defense system [BR:
ppse02048
]
Restriction and modification system (R-M system)
Type I R-M system
BN5_3172 (hsdM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
AviRa
RecG_dom3_C
Aminotran_1_2
MTS
Motif
Other DBs
NCBI-ProteinID:
CDM41728
UniProt:
W6R0E7
LinkDB
All DBs
Position
complement(3299692..3301617)
Genome browser
AA seq
641 aa
AA seq
DB search
MSGLAQLGEALLAAVPVDGSSIGNQTLFERLKAQLPEISEEQLWAARDALIEQGVLIKGR
GRGGSVLRAQASGTSLADQVLNKARERMAPVNTEEVSAGYVVQAAAAVKKAKAPKQQATS
IEAMEKTLWATADKLRANMDAAEYKHIVLGLIFLKYISDSFAGRREELTHKLLDENDDYY
LGDDDPEALNAELEDRDYYREVNVFWVPEVARWESIRAAAKQVDIGKRIDDALAAIEAEN
PRLKNILDKRYARAQLPDGKLGELVDLISTIGFGDDTSKARDLLGQVYEYFLGQFASAEG
KRGGQFYTPASIVKTLVAVLNPHHGKVYDPCCGSGGMFVQSEKFIEAHGGKLGDVSIYGQ
EANPTTWRLAAMNLAIRGIDFNLGKEPADTFVRNQHSDLRADFVLANPPFNISDWWHGSL
EGDPRWVYGTPPQGNANYAWLQHMLYHLKPSGRAGIVLANGSMSSSQNSEGEIRKAMVEA
DVVEVMVALPGQLFFNTQIPACLWFLAKQKTARPGEVLFIDARKLGTSVSRVQIELTDAD
IERIAQTVAKWRGEPLDMGGEIAEYQDIAGFCRSVKLAEIAEHGHVLTPGRYVGAEEVED
DDEAFAEKMQRLTQQLGEQMEKGAELDQLIRQKLGGLGYEI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttggcccaacttggcgaagccttgctggctgcagtgccggtagatggcagc
agcatcggcaatcaaaccttgtttgagcggctaaaagcacagttaccggagatcagtgaa
gagcagctctgggccgctcgcgatgcgctgatcgagcagggcgtgctgatcaaaggccgg
ggtcgcggtggttcggtattgcgcgcgcaagcctcgggcaccagcctggcggatcaggtg
ttgaacaaggcccgtgagcgtatggccccggtgaacactgaagaagtctcagccggttat
gtggtgcaagccgccgcagcggtgaaaaaggccaaagcgcccaagcagcaagccaccagc
atcgaggccatggagaaaaccctctgggccaccgccgacaagctgcgcgccaatatggac
gccgccgagtacaagcacatcgtgctcgggctgatcttcctcaagtacatctccgacagc
ttcgccggccgtcgcgaggagcttacgcacaagctgctggatgaaaacgacgactactac
ctgggcgacgatgatccggaggcgctcaacgctgagctggaagaccgcgactactaccgc
gaggtcaacgtgttctgggtgccggaagtggcgcgctgggagtctattcgcgccgctgcc
aagcaggtggatatcggcaagcgcatcgacgatgccctggctgccatcgaggcggaaaac
ccacggctgaaaaacatcctcgacaagcgctacgcccgcgcccagttgccggacggcaag
ctcggcgagctggtggatttgatctccaccatcggctttggtgacgacaccagcaaagcc
cgtgatctgctcggtcaggtctatgaatacttcctcggccagttcgccagcgccgaaggc
aagcgcggcgggcagttctatacgccggccagcatcgtcaaaaccttggtagctgtgctt
aacccgcaccatggcaaggtgtacgacccgtgctgcggctcgggcggcatgtttgtgcaa
tccgagaaatttatcgaagcccacggcggcaagctgggcgatgtgtccatctacggccag
gaagccaaccccaccacctggcgcctggcggcgatgaacctggccattcgcggcatcgac
ttcaacctcggcaaagagccggccgacacctttgtgcgcaaccagcactcggacctgcgc
gccgactttgtgctggccaacccgccgttcaatatcagcgactggtggcacggcagcctg
gaaggcgacccgcgctgggtgtatggcacaccgccgcaaggcaacgccaactacgcctgg
ctgcaacatatgctctaccacctcaagcccagcggccgtgccggtatcgtgctggccaac
ggctcgatgagttccagccagaacagcgaaggcgagatccgcaaagccatggtcgaggcc
gacgtagtggaagtcatggtcgcgctgcccggccagttgttcttcaacacgcagattccc
gcctgcctgtggttcctcgccaaacagaaaaccgcccgccccggtgaagtgctgtttatc
gacgcacgcaaactcggcaccagcgtgagccgagtgcagatcgagctgactgacgccgat
atcgaacgcatcgcccagaccgttgccaagtggcgcggcgagccgctggatatgggcggt
gagattgccgagtaccaggacatcgccggcttctgccgcagcgtcaaactggcggaaatc
gccgagcacggccatgtgctgacgccgggccgctatgtcggtgctgaagaggtggaggat
gacgacgaagcctttgccgagaagatgcaacggctgacccaacagcttggcgaacagatg
gaaaagggcgcggaactcgatcagttgatccggcagaagctgggggggctggggtatgaa
atctga
DBGET
integrated database retrieval system
