Pseudomonas pseudoalcaligenes: BN5_3946
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Entry
BN5_3946 CDS
T03772
Symbol
soxA
Name
(GenBank) sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse00260
Glycine, serine and threonine metabolism
ppse01100
Metabolic pathways
Module
ppse_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN5_3946 (soxA)
Enzymes [BR:
ppse01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BN5_3946 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BN5_3946 (soxA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
FAD_binding_2
HI0933_like
DAO
GIDA
FAD_binding_3
Pyr_redox_3
Thi4
AlaDh_PNT_C
SoxG
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CDM42488
UniProt:
W6R2M6
LinkDB
All DBs
Position
complement(4059991..4063014)
Genome browser
AA seq
1007 aa
AA seq
DB search
MSQVNRLAKGGRIDRSQALSFTFNGQTYQGYAGDSLAAALLANGVDIVGRSFKYSRPRGI
VAAGAEEPNAVLQIGSTEAAQIPNVRATQQALYSGLVANSTNGWPSVNTDLMGILGKVGG
GMMPPGFYYKTFMYPQNLWMTYEKYIRKAAGLGRSPTEVDPDIYDQLNQHCDVLIVGAGP
AGLAAALAAGRSGARVILADEQEEFGGSLLDTRETLDGKPAADWVAQAIAELQKMPEVTL
LPRATVNGYHDHNFLTIHQRLTDHLGETAPMGQARQRMHRVRAKRVVLASGAHERPLVYA
NNDVPGNMLAGAVSTYVRRYGVAPGQELVLSTNNDYAYRVVLDWLDAGRKVVAVADARSN
PRGSWVEEARARGVRILTGSAVVEARGSKRVTGARICAIDAKAHKVTSPGEVLDCDLIVS
SGGYSPVVHLASHLGGRPEWREDILGFVPGPGNGIQQRIDAGAVNGVFALGDVLANGFEA
GAKAAADTGYKAVSGSLPQAEVRQEEPMLALFQVPHDKSTARAPKQFVDLQNDVTAAGIE
LATREGFESVEHVKRYTALGFGTDQGKLGNINGLAIAARSMGISIVQMGTTMFRPNYTPV
TFGAVAGRHCGELFDAKRYTAMQAWHVKNGAEFEDVGQWKRPWYFPKNGEDLHAAVAREC
LAVRNSVGILDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDD
GVTACLADNHFLMTTTTGGAARVMEWLEIYHQTEWPELKVYFTSVTDHWATMTLSGPNSR
KLLAKVTDIDLDKDAFPFMSWKEGLVGGVPARVFRISFTGELSYEVNVQADYALGVWEQI
IEAGKEFDLTPYGTETMHVLRAEKGFIIVGQDTDASVTPDDLNMGWCVGRTKPFSWIGKR
GMNRDDCLREDRKQLVGLKPVNPNQVLPEGAQLVFDPKQSIPMQMVGHVTSSYMSAAMGY
SFAMAVVKGGLKRMGERVFAPLADGSLIEAEICSSVFYDPKGDRQNV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcaatcgtcttgccaagggcggtcgtatcgaccgcagtcaggcgctgagc
ttcaccttcaatggccagacctaccagggttacgccggcgacagcctggccgccgcgctg
ctggccaatggcgtggatatcgtcggtcgcagcttcaagtactcgcgcccacgcggcatc
gtcgctgcgggcgcggaagagcccaacgccgtgctgcagatcggctccaccgaagcggcg
cagatccccaacgtgcgcgccacccagcaggcgctgtacagcggtctggtggccaacagc
accaacggctggccgagcgtcaacaccgacctgatgggcatcctcggcaaggtcggcggc
ggcatgatgccgcccggtttctactacaagaccttcatgtatccgcagaacctgtggatg
acctacgagaagtacatccgcaaggccgcaggcctgggtcgctcgcccaccgaagtcgac
ccggatatctacgaccagctcaaccagcactgcgacgtgctgatcgtcggcgccggccct
gccggtctcgccgccgcgctggcggctggccgtagcggcgcgcgggtgattcttgccgat
gagcaggaagagttcggcggcagcctgctcgacactcgcgaaaccctcgacggcaagccc
gccgccgactgggtggcgcaggccatcgccgagctgcagaaaatgccggaagtgaccctg
ctgccacgcgccacggtcaacggctaccacgaccacaacttcctcaccatccaccagcgc
ctgaccgatcacctcggtgaaacagcgccgatgggccaggctcgccagcgtatgcaccgc
gtccgcgccaagcgcgtggtattggccagcggcgcccatgagcggccgctggtgtacgcc
aacaacgatgtaccgggcaatatgctggctggcgccgtgtcgacctacgtgcgtcgctat
ggcgtggcgccagggcaggaactggtgttgtcgaccaacaacgattacgcctaccgcgtg
gtactcgactggctcgatgccgggcgcaaggtggtggctgttgccgatgcgcgcagcaac
ccgcgcggcagctgggtcgaggaagcgcgtgcgcgtggcgtgcgcatcctcaccggcagc
gcagtggtcgaggcacgtggcagcaagcgcgtgaccggtgcgcgtatctgcgccatcgat
gccaaggcacacaaggtcaccagccctggtgaagtgctcgactgcgacctgatcgtcagc
tccggtggctacagcccggtggtgcacctggcgtcgcacctgggtggtcgccccgaatgg
cgcgaggacatcctcggtttcgtgccggggccgggcaacggcatccagcagcgcatcgac
gccggtgcggtgaatggcgtgttcgccctcggcgacgtgcttgccaatggctttgaggcg
ggcgccaaggcggctgccgataccggctacaaggccgtcagtggcagcctgccacaggcc
gaggtgcgtcaggaagagccgatgctggcgctgttccaggtgccgcacgacaagtccacc
gcgcgtgcgccgaagcagttcgtcgacctgcagaacgacgtcaccgcggccggcatcgag
ctggcgacgcgtgaaggcttcgagtcggtcgagcacgtcaaacgttacaccgcactgggc
ttcggcaccgaccagggcaagctgggcaatatcaacggtctggccatcgccgcgcgttcg
atgggcatcagcatcgtgcagatgggcaccaccatgttccgcccgaactacacgccggtg
actttcggcgccgtggcaggtcgtcattgtggtgagctgttcgatgccaagcgctatacc
gcgatgcaggcctggcatgtgaagaacggcgccgagttcgaggacgttggccagtggaag
cgtccctggtacttcccgaaaaatggcgaggatctgcacgccgccgtggctcgtgaatgc
ctggccgtgcgcaacagcgtgggcatcctcgatgcctcgaccctgggcaagatcgacatt
caaggcccggatgcgcgcgagttcctcaaccgcgtctacaccaacgcctggaccaagctg
gacgtgggcaaggcgcgctacggcctgatgtgcaaggaagacggcatggtcttcgacgac
ggtgtcaccgcctgcctggccgacaaccatttcctcatgaccaccaccaccggcggcgcc
gcgcgggtgatggaatggctggagatctaccaccagaccgaatggccggagctgaaggtg
tacttcacctcggtcaccgaccactgggcgaccatgaccctgtccggccccaacagccgc
aagctgctggccaaggtcaccgacatcgacctggacaaggacgccttcccgttcatgagc
tggaaggaaggcctggtcggcggtgtgccggcgcgggtgttccgcatttccttcaccggt
gagctgagctacgaggtcaacgtgcaggccgactacgccctgggggtgtgggagcagatc
atcgaagccggcaaggagttcgacctgacgccttacggcaccgagaccatgcacgtgttg
cgtgcggagaagggcttcatcatcgtcggccaggacaccgatgcctcggtgaccccggac
gacctcaacatgggctggtgcgttggccgtaccaagcctttctcctggatcggcaagcgc
ggcatgaaccgcgatgactgcctgcgcgaagaccgcaagcagcttgtggggctgaaaccg
gtcaacccgaaccaggtgctgccggaaggcgcgcagttggttttcgacccgaaacagtcc
atcccgatgcagatggtcggccacgtcacctccagctacatgagcgcggcgatgggttac
agcttcgccatggcggtggtcaagggcggcctaaagcgcatgggcgagcgcgtgttcgcg
ccgctggccgatggcagcctgatcgaagccgaaatctgcagctccgtgttctatgacccg
aaaggggatcgccagaatgtctaa
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integrated database retrieval system
