Pseudomonas pseudoalcaligenes: BN5_3947
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Entry
BN5_3947 CDS
T03772
Symbol
soxD
Name
(GenBank) sarcosine oxidase, delta subunit
KO
K00304
sarcosine oxidase, subunit delta [EC:
1.5.3.24
1.5.3.1
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse00260
Glycine, serine and threonine metabolism
ppse01100
Metabolic pathways
Module
ppse_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN5_3947 (soxD)
Enzymes [BR:
ppse01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BN5_3947 (soxD)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BN5_3947 (soxD)
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Gene cluster
GFIT
Motif
Pfam:
SoxD
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
CDM42489
UniProt:
W6RKV0
LinkDB
All DBs
Position
complement(4063011..4063337)
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AA seq
108 aa
AA seq
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MLHIFCPYCGELRSEEEFHAKGQAHIARPLDPDACSDAEWGEYMFFRDNPRGIHHELWVH
AAGCRKYFNATRHTVTYEILETYKVGEKPSVTAAGATDKQAVVEGVTA
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacatcttctgcccttactgtggcgaactgcgctccgaagaggaattccacgcc
aagggccaggcgcacatcgcccgcccgctcgatcccgatgcctgcagcgatgccgagtgg
ggcgagtacatgttcttccgcgacaacccgcgcggcatccaccacgagctgtgggtacac
gcagccggttgccgcaagtatttcaacgccacccgccacaccgtgacctacgagatcctc
gagacctacaaggtcggcgagaagccttcggtcaccgcagccggggccaccgacaagcaa
gccgtggtagaaggagtaacggcatga
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