Pseudomonas psychrotolerans: BJP27_08525
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Entry
BJP27_08525 CDS
T05074
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
ppsl
Pseudomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsl03016
]
BJP27_08525
Enzymes [BR:
ppsl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
BJP27_08525
Transfer RNA biogenesis [BR:
ppsl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BJP27_08525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
FAD_binding_2
GIDA
Pyr_redox_2
Pyr_redox
HI0933_like
3HCDH_N
Thi4
AlaDh_PNT_C
Lycopene_cycl
FAD_oxidored
MurD-like_N
Pyr_redox_3
NAD_Gly3P_dh_N
ApbA
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
APQ11550
LinkDB
All DBs
Position
1894240..1896180
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AA seq
646 aa
AA seq
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MTDFQHAQLDWDPTGQPLSRTYGDVYFSRASGLEETRYVFLQQNRLPERFAALQAGEVFC
IGETGFGTGLNFLCAWQLFEALAPQGARLHFVSVERFPLTAADLAQALALWPELAAYSAA
LQRQYQAIHPGFQRLILGEGRITLTLLVGDVLERLPELDARCDAWFLDGFAPAKNPEMWT
PALFAELARLSGPGTTLATFTCAGFVRRGLNEAGFAMGKVPGFGHKREMLAGVLERPVAT
VTPPWYARPPRPTGPRTAVVIGAGLAGCATAASLARRGWQVRVLERHAAPAQEASGNPQG
VLYLKLSAHDTPLSRLILDGFGLTLRELQALPPGSAWSPCGVLQLALDAKDAARQAQLVA
HFPAGLLQPLAQDAASQRAGLGLAAGGLFFPEGGWVHPPALCAHWLAHPNIELVTGVEVV
DLQPTPAGWRLGTRAAAFEATVIVVASAAQAKSLLPELPLKAIRGQLSNLPETPRSQALN
TVVCGEGYLAPAREGRHCLGASFVFDREDTEPSQAEHASNLQLLAELSPELAASYSAADL
DGRVAFRCTSPDYLPLVGPVVDEALFAQRYQVLGQDARQIPDLPAPWRPGLYLNLAHGSR
GLVTTPLAAELLAAWLEDEPLPVARRVAEACHPNRFPLRRLIRGQG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttccagcacgcccagctcgactgggaccccaccgggcaacccctgtcccgt
acttatggcgatgtgtacttctcccgcgccagcggcctggaagagacccgctacgtcttt
ctgcaacagaatcgcctgcccgaacgcttcgccgcgctgcaggccggcgaggtcttctgc
atcggcgaaaccggcttcggcaccggcctcaatttcctctgcgcctggcagctgttcgag
gccctggcgccccagggtgcccgcctgcacttcgtcagcgtcgagcgttttccgctcacc
gccgccgatctcgcccaggcgctggcgctgtggccagagctggcggcctatagcgccgcg
ctgcaacggcagtaccaggccatccatcccggcttccagcgcctgatcctgggtgagggc
cggatcaccctcaccctgctggtgggcgatgtgctggagcgcctgccggagctggacgcc
cgctgcgatgcctggttcctcgatggcttcgccccggccaagaatcccgagatgtggacg
cccgcgctgttcgccgaactggcgcggctatccggccccggcaccaccctcgccaccttc
acctgcgccggcttcgtgcggcgtgggctcaacgaagccggcttcgccatgggcaaggtg
cccggcttcggccataagcgggagatgctggccggcgtgctggagcgcccggtcgccacg
gtgacgcccccctggtatgcccgcccgccccgccccacgggcccacgcaccgccgtggtg
ataggcgcggggctggccggctgtgccaccgccgccagtctcgcccggcgcggctggcag
gtacgggtgctcgaacggcatgccgccccggcgcaggaagcctccggcaatccccaaggc
gtgctctatctcaagctgtcggcccacgacaccccgctcagccggctgatcctggacggc
ttcggcctgacgctgcgcgaattgcaggccctgccgccgggctcggcctggtcgccctgc
ggggtcttgcaactggcactggacgccaaggacgccgcgcgccaggcacagctggtcgcg
cactttcctgccggcctgctgcagccactggcgcaggacgccgccagccagcgtgccggt
cttggtcttgcggcgggcggcctgttctttccggaagggggctgggtccatccgcccgcg
ctgtgcgcgcactggctggcccacccgaacatcgagctggtcaccggcgtggaggtcgtc
gacctgcagccaaccccggcaggctggcgtctcggcacccgcgctgcggccttcgaggcg
acggtgatcgtggtggccagcgccgcccaggccaagagcttgctccccgaactgccgctc
aaggccattcgcgggcaactgtccaatctgccggaaaccccgcgcagtcaggcgttgaac
accgtggtctgcggcgaaggctacctggccccggcgcgcgaaggtcggcactgcctgggt
gccagcttcgtcttcgaccgtgaagataccgagcccagccaagcggagcacgccagcaac
ctgcaactgctcgccgagctttcgcccgaattggccgccagctatagcgccgcagacctc
gacggtagagtggcctttcgctgtacctcgccggactacctgccactggttggcccggtg
gtggacgaagccttgttcgcccagcgttatcaggtactcggccaggacgcgcgtcagata
cccgatctgccggcgccctggcgtcccggtctctacctgaacctggcccatggttcacgc
ggcctggtcaccacgccactggccgccgaactgctggcggcctggctggaggacgaaccc
ctgccggtggcgcggcgggtcgccgaggcctgtcaccccaatcgtttccccctgcgccgg
ctgatccgcggccagggttag
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