Pseudomonas psychrotolerans: BJP27_12450
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Entry
BJP27_12450 CDS
T05074
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppsl
Pseudomonas psychrotolerans
Pathway
ppsl00730
Thiamine metabolism
ppsl01100
Metabolic pathways
ppsl01240
Biosynthesis of cofactors
ppsl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BJP27_12450
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BJP27_12450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsl03016
]
BJP27_12450
Enzymes [BR:
ppsl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BJP27_12450
Transfer RNA biogenesis [BR:
ppsl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BJP27_12450
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
APQ12271
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All DBs
Position
complement(2771938..2773392)
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AA seq
484 aa
AA seq
DB search
MKLIIKVFPEITIKSRPVRKNFIRQLVKNIRVVLRDLDPDVLVDGVWDNVTLDTTVSEPR
VLAEMKQRLACTPGIGQFLEVHEYPLGDFETILALCERHFGERVRGKVFSVRCKRAGKHD
FSSMDVERYVGGGLRERCGGAGIALKNPEVNVRLEIRDQQLFIIDEHHEGLGGYPLGALE
QVLVLMSGGFDSTVAAYQMMRRGMVSHFCFFNLGGRAHELGVMEVAHYLWEKFGRSQRVL
FISVPFEEVVGQILTQCDDSHMGVILKRMMLRAASRIAEQLQIEALVTGEAVSQVSSQTL
TNLAVIDKATDTLVLRPLLASHKQDIIDTAQRIGTADFAKHMPEYCGVISVNPTTKAKAM
RVEHEESKFDLAVLDAALERARFITVDKVIEELGKDVQVEELAQPLPGQIVVDIRHPDAQ
EEAPLEIAGIEVQAMPFFALNSRFKELDDSRQYLLYCDRGVMSRLHAHHLLTEGHANVRV
YRPA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcatcatcaaggtctttccggaaatcaccatcaagagtcgcccggtgcgcaag
aatttcattcgccaattggtgaagaacattcgcgtcgtgctgcgtgatctggatccggat
gtgctggtcgatggggtatgggacaacgtcaccctggacaccacggtcagcgaaccgcgg
gtgctggcggagatgaagcagcgcctggcctgcacccctggcatcggtcagttcctcgag
gtgcacgagtatccgctgggcgacttcgaaaccatcctcgccctgtgcgagcgccatttc
ggcgagcgggtccgcggcaaggtgttctcggtgcgctgcaagcgcgccggcaagcatgac
ttctcctcgatggacgtggaacgctacgtcggtggcggtctgcgcgagcgctgcggcggt
gccggcatcgccctgaagaatcccgaggtgaacgttcgcctggagatccgcgaccagcag
ctgttcatcatcgacgagcaccacgaggggctgggcggttatccgctgggcgccctggag
caggtgctggtgctgatgtccggtggtttcgattccaccgtcgccgcctaccagatgatg
agacgcggcatggtcagccacttctgcttcttcaatctcggcggccgcgcccacgaattg
ggcgtgatggaagtggcgcactatctgtgggagaaattcggtcgctcccagcgggtgctg
ttcatcagcgtgcccttcgaggaagtggtgggacagatcctcacccagtgcgacgacagc
cacatgggcgtgatcctgaaacgcatgatgctgcgcgcggccagtcgcatcgccgagcag
ttgcagatcgaggcgctggtgaccggcgaggccgtctcccaggtctctagccagaccttg
accaacctggcggtgatcgacaaggccaccgataccctggtgctgcgcccgctgctggcc
agccacaagcaggacatcatcgacaccgcccagcgcatcggcaccgccgactttgccaag
cacatgcccgaatactgcggcgtcatctcggtgaatcccaccaccaaggccaaggccatg
cgggtggagcacgaggaaagcaagttcgacctggcggtgctcgacgccgccctggagcgc
gcccgcttcatcaccgtcgacaaggtgatcgaagagctgggcaaggacgtgcaggtcgaa
gagctggcacagcccttgccaggtcagatagtggtggacatccgccatcccgacgcccag
gaagaggcgccgctggaaattgccggcatcgaagtgcaggccatgcccttcttcgccctg
aacagccgtttcaaggaactggacgacagccgccagtacctcctttattgcgaccgcggg
gtgatgagccggctgcacgcccatcacctgctcaccgaagggcacgccaatgtgcgcgtt
tatcgtccggcctaa
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