Parasedimentitalea psychrophila: QPJ95_12610
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Entry
QPJ95_12610 CDS
T09434
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppso
Parasedimentitalea psychrophila
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppso03009
]
QPJ95_12610 (rimO)
Enzymes [BR:
ppso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QPJ95_12610 (rimO)
Ribosome biogenesis [BR:
ppso03009
]
Prokaryotic type
ribosomal protein modification factors
QPJ95_12610 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Thioredoxin_6
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WIY23500
UniProt:
A0A9Y2KWB3
LinkDB
All DBs
Position
complement(2586577..2587980)
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AA seq
467 aa
AA seq
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MTSNPPELRPDLAPKLQIGDAPRAGQPTIGMVSLGCPKALVDSERILTRLRAEGYGISPD
YTGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVT
GPHQYEQVLDAVHAAVPPDPNPFVDLLPATGVQLTPRHFSYLKISEGCNHRCKFCIIPDM
RGRLVSRPAHAVLREAEKLVAAGVRELLVISQDTSAYGMDRKHDLNPWKGAEVRSHITDL
TRELGRLGSPQDLWVRLHYVYPYPFVRELIPLMADPDTAVLPYLDIPFQHSHPDMLKRMA
RPAAGAKTLDEIAAWRATCPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFKY
ENVAGARSNALPEHVAEELKQERWERFMQKAQAISEAKLQAKVGQVMQVIIDDIDEDGIA
TCRTKADAPEIDGNLFIDEGTEGLSVGDLVTVEVDEAGEYDLWGRTV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaatccgccagagctccgccccgaccttgccccgaaactgcaaatcggtgat
gcgccacgtgccggccagccgaccattggtatggtcagcctcggctgccccaaggcgctg
gtggacagtgaacgcatcctgacccggctgcgcgccgagggctacgggatctcgcccgat
tacaccggggctgatgcggtgatcgtcaacacctgcggtttcctcgacagtgccaaggcc
gaaagcctggaggccattggcgaggcgctgaaggagaacggcaaggtgattgtcaccggc
tgtctcggcgctgaacccgattatatccgcgagcaccacccgcgcattctggcggtcacc
ggcccgcatcaatacgaacaagtgctggacgcggtgcatgccgccgtgccgccagatccc
aacccctttgtcgacctgctgcccgccaccggcgtccagctgacgccgcgccatttcagt
tatctgaagatctcggaaggttgcaatcaccgctgcaagttctgcatcatccccgatatg
cgcggccgtctggtgtcgcgcccggcccacgccgttctgcgtgaggccgagaagctggtc
gctgccggggtgcgcgaactgctggtaatctcgcaggatacctcggcctatgggatggac
cgcaagcatgatctgaacccgtggaagggcgctgaggtgcgcagccatatcaccgatttg
acccgcgaactgggccgcctgggctctccgcaggacctgtgggtgcggctgcactatgtc
tacccctacccattcgtgcgcgagctgatcccgctgatggcggaccctgacaccgcagtg
ctgccctatctggatatcccgttccagcattcgcacccggatatgctgaaacgcatggcg
cggccggcggcgggtgccaagaccctggacgagatcgccgcctggcgcgccacctgcccc
gacatcaccctgcgctcgacctttattgtcggctaccccggtgagactgaggcagagttc
cagcacctgctggactggatggacgaggcgcagctggaccgtgttggctgctttaagtac
gaaaacgtcgcgggtgcgcgctccaacgcgctgccggaacatgtcgcagaagagctcaag
caagagcgctgggagcggttcatgcaaaaggcgcaggcgatatccgaggcgaagctgcag
gccaaggtgggtcaggtgatgcaggtgatcattgatgacatcgacgaagacggcatcgcc
acctgccgcaccaaagctgacgcccccgagattgacggcaatctgttcattgacgagggg
accgaggggttgtcggtcggcgatctggttaccgttgaagttgatgaggctggggagtat
gacctgtggggacgaactgtttga
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