Planktothrix pseudagardhii: NO713_00145
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Entry
NO713_00145 CDS
T08299
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppsu
Planktothrix pseudagardhii
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsu03009
]
NO713_00145 (rimO)
Enzymes [BR:
ppsu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NO713_00145 (rimO)
Ribosome biogenesis [BR:
ppsu03009
]
Prokaryotic type
ribosomal protein modification factors
NO713_00145 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Autoind_bind
Motif
Other DBs
NCBI-ProteinID:
CAD5912685
UniProt:
A0A9W4CDS3
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All DBs
Position
I:complement(193736..195052)
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AA seq
438 aa
AA seq
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MATQPTIAISHLGCEKNRIDSEHILGLLVQAGYQVDSNEELADYVIVNTCSFIEAAREES
VRTLVELADAKKKIVITGCMAQHFQEQLLDELPEAVAVVGTGDYHKIVDVIKRVEQGERV
KEISAEPTYIADETVPRYRTTSEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVT
EAQQLADQGVQEIILISQITTNYGLDLYGEPKLAELLRALGKVDIPWIRMHYAYPTGLTP
NVIAAIQDTPNVLPYLDLPLQHSHPDVLRAMNRPWQGRVNDQIIEKLKTAIPDAVLRTTF
IVGFPGETEEHFEHLREFVQRHEFDHVGVFTFSPEEGTPAYQLPNQLPQEVMDARRDALM
QVQQPISLKQNQKSIGQVVDVLIEQQQPQTGELIGRSSRFAPEVDGLVYIEGEARLGSLI
KVQITDADIYDLYGYVLE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcagccaacgattgcgatctctcaccttggttgcgaaaaaaatcgcattgac
tccgaacatatcctcggtttactggtacaagcaggctatcaagtcgattctaacgaagaa
ttagccgattacgttattgtcaatacctgtagttttattgaagccgcgcgggaagaatcc
gttcgcaccttagtagaattagcagatgccaagaaaaaaattgtgatcacaggctgtatg
gcgcagcacttccaagaacaactgttagacgaactcccggaagctgtcgctgttgtggga
actggagattatcataaaattgtcgatgtgatcaaacgggtcgaacagggagaacgggtt
aaagaaatttcggccgaacccacctatattgcggatgaaaccgttcctcgttatcgtacc
actagcgagggggttgcctatttgcgagtcgcagaaggctgtgactatcgctgtgccttt
tgtattattccccacttgcgcggaaaccagcgatcgcgtactatagaatcaattgttact
gaagcccagcaattagccgatcaaggggttcaggaaataatactcatttcccaaattacc
accaactacggactggatctctacggtgaacccaaactggcagaattattacgggcatta
ggaaaagttgatattccctggatacggatgcactatgcctatccaacggggctaacccca
aacgtaattgcagcaattcaagacaccccgaacgttttaccttatttagatttaccgcta
caacattcacaccccgatgtgttacgggcgatgaaccgtccttggcaaggacgagtcaac
gatcagattattgaaaaactgaaaaccgccatcccagatgcggtactgcgtaccaccttt
attgttggctttccaggggaaactgaggaacactttgaacacctccgcgaatttgtgcaa
cgtcacgaatttgatcacgtgggcgtgtttaccttctctcccgaagaaggaaccccggct
tatcagttacccaatcaactgccacaagaggttatggatgcgcgtcgggatgccttaatg
caggtacagcaacccatttccttgaaacaaaatcaaaaatctatcggacaggtggtggat
gttctcattgaacaacaacagccgcaaaccggggaactcatcggtcgttcatcccgtttc
gccccggaagtagacgggttagtctatattgaaggcgaggctcgtttaggttcactgatc
aaagtccaaatcaccgacgccgatatttatgatctctatgggtacgtcttagaatag
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