Persicobacter psychrovividus: PEPS_22610
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Entry
PEPS_22610 CDS
T09740
Symbol
liuD
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase subunit alpha
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv00907
Pinene, camphor and geraniol degradation
ppsv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PEPS_22610 (liuD)
Enzymes [BR:
ppsv01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
PEPS_22610 (liuD)
BRITE hierarchy
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
RimK
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_Ter
GCV_H
ATP-grasp_4
PTS_EIIA_1
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
BDC99980
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Position
2692055..2694028
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AA seq
657 aa
AA seq
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MNPKSFNKILIANRGEIARRIIRTCHRLGINTVAVFSEADKHEAFVYEAKEAVALGGNRP
DESYLRQELIIEAAQKTNAQAIHPGFGFLSENTDFAAKCEAAGITFIGPNAEAIRLMGDK
KTAKQLMAENGVPVVPGYNGDDQSLEAFIREAREIGYPVLLKATAGGGGKGMRVVNSEEE
MSDAFDAAKREAKSAFGNDLMLLEKYFASSRHIEFQIFGDQHGQAIHLYERDCSIQRRHQ
KIIEESPSPALNEVTRARMGGVAVKAAEALNYDNAGTVEFLFAEDNSFYFLEVNTRLQVE
HPVTEMITGLDLVEWQIRIAQGEKLPMEQAEIPQQGHALEVRVYAEDPSNNFLPQTGKIL
KFDYHQHPQVRVDAGVETGSEVSIYYDPMIAKVITHSATRAENLRLMHYTLEQTALIGVN
NNIDFLKGIMRHEVFQSGEFDTQFLVKYQVESQPSTTLTEEALCVTLIYEWLERSKKQPY
FRHIPSGWRNNLSMLQQITYKIAGSSTNIAYKRTKTDTLECEFNDKQFTTEIIKQAGDSW
IIQINGTIRKWQIFPSKTGYFIYTPTEGTVKVDTVPRYPTSQASKSDDAYTSPMPGQIIK
VMVKAGDEIKTGDPLLVLSSMKMENTIYAHSEGIIEEVFVKADDMVESDKVFLTIKS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaaatctttcaataaaatactgattgccaaccgtggggaaattgcccgcaga
attattcgtacctgccacaggctcggcatcaatacggtggcggtgttttctgaagcggac
aaacatgaggcctttgtatatgaagccaaagaggctgtagccctcggcggtaatcggccc
gacgaatcctacctccgtcaggaactgattatcgaggcagcacaaaaaacgaacgcacag
gccattcatcctggcttcggcttcctctcggaaaacacagactttgccgcaaaatgtgaa
gcggcaggcatcacgttcatcgggcccaatgctgaagcaatacgactgatgggcgacaaa
aaaacagccaaacaacttatggcagaaaatggcgtgcctgtggttcctggctacaatgga
gatgaccaatcgctggaagcatttatccgtgaagcgcgagaaattggctatccagtttta
ctgaaagcaacagcgggaggaggaggaaaagggatgcgtgtggttaatagtgaagaagaa
atgtctgatgcttttgatgccgccaaacgggaggctaaatccgcttttggcaacgacctg
atgctcctcgaaaaatattttgcctccagcaggcatatcgaatttcaaatctttggagat
cagcatgggcaggcaattcatctttatgagcgtgattgctccattcagcggcgccaccaa
aaaattattgaagaaagcccctctcccgccctcaatgaagttacccgcgcccgcatgggt
ggtgttgcggtgaaggctgccgaagccttgaattatgacaatgcaggcaccgtagaattt
ctttttgcggaagacaattccttttatttcctggaggtcaacacccgattgcaggtggaa
caccctgttacggaaatgatcactggcctcgatctggtggaatggcagatcagaattgca
cagggggagaaactaccaatggagcaagccgaaatcccgcagcaggggcatgcccttgag
gtgcgggtttatgccgaagacccttcaaacaacttcctgccacaaacaggaaaaatccta
aaattcgattatcatcagcacccacaggtacgggttgatgcaggtgtggagactggttcg
gaggtcagtatttattacgacccaatgattgccaaggtcattacacacagtgccacaagg
gctgaaaacctgcgcctcatgcattacacattggagcaaaccgccctgattggcgtcaat
aataatattgatttcctgaaagggattatgcggcatgaggtatttcagtctggtgaattc
gacacccaatttttggtaaaataccaagttgaaagtcagccctccaccacccttacggag
gaagctttatgcgttacgctgatttacgaatggctcgaaagaagtaaaaaacagccttat
ttccgccatatccccagtgggtggcgcaacaacctttctatgttgcaacaaataacgtac
aaaatagcagggtcatcgaccaacattgcctataagcgcactaaaacggatacattggaa
tgcgaattcaatgataagcaattcaccactgaaatcatcaaacaggccggcgacagttgg
attattcaaattaatggaacgatcagaaagtggcagatatttccatcaaaaacaggctac
tttatatacacccccacagaaggaacggttaaggttgatactgtaccccgctaccccaca
tcgcaagccagcaaaagtgatgacgcttacacctctccgatgcctggccagatcattaag
gtaatggtaaaggcaggtgatgagatcaaaactggtgatcccttactggtgctgagttcc
atgaaaatggaaaatacaatttacgcacattcggagggcatcattgaggaggtctttgta
aaggctgatgatatggtagaatctgataaagtttttctgaccattaaatcataa
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