Pseudomonas putida S16: PPS_4018
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Entry
PPS_4018 CDS
T01570
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppt03009
]
PPS_4018
Enzymes [BR:
ppt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PPS_4018
Ribosome biogenesis [BR:
ppt03009
]
Prokaryotic type
ribosomal protein modification factors
PPS_4018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AEJ14559
UniProt:
F8G0I1
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All DBs
Position
4540388..4541719
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDDVKQD
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccaaaagcc
ctggtcgattccgagcgcatcctgacccagttgcgcatggaaggctatgaagtcgtgccc
acctacgaggacgccgacgtagtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgttggaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtcacc
ggctgcatgggtgtcgaggaaggcagcatccgcgacgtacacccgagcgtgctgtcggtc
accggcccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtggtgccaccacgc
caggaccacaacccgctgatcgacctggtgccgccgcagggcgtcaagctgaccccgcgc
cattatgcgtacctgaagatttccgaaggctgcaaccacagctgcagtttctgcatcatc
ccgtcgatgcgcggcaaactggtcagccgcccggtcggcgaagtgctgagcgaggccgag
cgcctggtcaaggccggggtcaaggagatcctggtgatttcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgagctgtgcgaagccctgagcagcctgggtgcctgggtacgtctgcactacgtgtac
ccgtacccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggatatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgcccggcc
ttcgaagaccgcaccctggcacgtatcaagaactggcgcgagcagtgcccggagctggtg
attcgctccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccagtacctg
ctggactggttgaccgaagcccagctggaccgcgtgggctgcttccagtactcgccggta
gaaggcgccccggccaacgacctgggcctggaagaagtgccggacgacgtcaagcaggac
cgctgggaccgcttcatggcccaccagcaggccatcagcgccgcccgcctgcaactgcgc
atcggcaaggaaatcgacgtgctgatcgatgaagtggaagagcaaggttcggttggccgc
agcttcttcgatgccccggaaatcgacggcagcgtgttcatcgatggcgaccacggcttc
aagccgggtgacaaggtacgttgccgcgtggtggatgccgacgaatacgacatgtgggct
gaacccatctaa
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