Pseudomonas putida KT2440: PP_0325
Help
Entry
PP_0325 CDS
T00114
Symbol
soxA
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00260
Glycine, serine and threonine metabolism
ppu01100
Metabolic pathways
Module
ppu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PP_0325 (soxA)
Enzymes [BR:
ppu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PP_0325 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PP_0325 (soxA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
Pyr_redox_3
DAO
GIDA
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AAN65956
UniProt:
Q88R09
LinkDB
All DBs
Position
389727..392741
Genome browser
AA seq
1004 aa
AA seq
DB search
MSQTYRLASGGRIDRSKVLNFTFNGKTYQGYAGDSLAAALLANGVDIVGRSFKYSRPRGI
IAAGTEEPNAILQIGSSEATQIPNVRATQQALYAGLVATSTNGWPNVNNDVMGILGKVGG
SMMPPGFYYKTFMYPKSFWMTYEKYIRKAAGLGRAPLQNDPDSYDYMNRHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDTRETLDGKPAADWVNAVVKELEGLPEVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRHRVHRVRAKRVVLAAGAHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGRKLVLSTNNDHAYRAALDWHDAGLQVVAIADARHN
PRGSLVEEARAKGIRILTSSAVIEAKGSKHVTGARVAAIDVQAHKVTSPGEVLECDLIAS
SGGYSPIVHLASHLGGRPVWRDDILGFVPGDAPQKRECVGGINGVYALGDVIADGFEGGV
RAATEAGFKATVGTLPKTVARKEEATVALFLVPHDKGTKGPKQFVDQQNDVTAAGIELAT
REGFESVEHVKRYTALGFGTDQGKLGNINGLAIAARSIGITIPEMGTTMFRPNYTPVTFG
AVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKAGEDIHAAVTRECKAV
RDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVT
ACVGDNHFIMTTTTGGAARVLQWMELYHQTEWPELKVYFTSVTDHWATMTLSGPNSRKLL
SELTDIDMDKEAFPFMTWKEGNVGGVPARVFRISFTGELSYEVNVQANYAMGVLEQIIEA
GKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMNPDDLNMSWCVGRNKPFSWIGLRGMN
REDCVRENRKQLVGLKPVDPTKWLPEGAQLVFDPKQPIPMDMVGHVTSSYASNSLGYSFA
MGVVKGGLKRMGERVYSPQADGSVIEAEIVSSVFFDPKGERQNV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacctatcgcctcgccagcggcggccgtatcgaccgcagcaaggtcctgaac
ttcaccttcaacggcaagacctaccagggttatgccggtgacagcctggccgccgcgttg
ctggccaacggcgtcgacattgtcggccgtagcttcaagtactcgcgcccacgcggcatc
atcgccgccggtaccgaagagccgaacgccatcctgcagatcggctccagcgaagctacc
cagatccccaacgtgcgcgccacccaacaggcactgtacgcgggccttgtcgccaccagc
accaacggttggccgaacgtcaacaacgacgtcatgggcatcctcggcaaggttggcggc
agcatgatgccgccgggcttctactacaaaaccttcatgtaccccaaatcgttctggatg
acttacgagaagtacatccgtaaagccgccggcctgggccgtgcgccgctgcagaacgat
cctgacagctacgactacatgaaccggcactgcgacgtgctgatcgtcggcgccggccct
gctggcctggctgccgcactggccgctgcgcgcagtggtgcccgcgtgatcctggctgac
gagcaggaagagttcggcggcagcctgctcgacacccgcgaaaccctcgacggcaagcct
gctgccgactgggtcaacgccgtggtcaaagagctggaaggcctgccggaagtgaccctg
ctgccacgtgccacggtcaacggctaccacgaccataacttcctgaccattcacgagcgc
ctcaccgaccacctcggcgatcgcgccccgatcggtcaggttcgccaccgcgtgcaccgc
gttcgcgccaagcgcgtggtactggctgccggcgcccacgagcgcccgctggtgtacggc
aacaacgacgtgccgggcaacatgctggccggtgctgtatccacctatgttcgccgctat
ggcgtggcgccgggtcgcaagttggtactgtcgaccaacaacgaccacgcttatcgcgcc
gcgctggactggcacgacgcaggcctgcaagtggtcgccatcgccgacgcccgccacaac
ccacgtggctcgctggttgaagaagcgcgtgccaaaggcattcgcatactcacctccagc
gccgtgatcgaggccaaaggcagcaagcacgtcaccggcgcccgtgtggcggcgatcgat
gtgcaggcgcacaaagtcaccagcccaggcgaagtccttgagtgcgacctgatcgcctcc
tcgggcggttacagcccgatcgtgcacctggcttcgcacctgggcggtcgcccggtatgg
cgtgacgacatccttggcttcgtgccgggcgatgcgccgcagaagcgtgagtgcgtcggt
ggtatcaacggcgtgtatgccttgggcgatgtcattgccgatggcttcgaaggcggcgtc
cgcgcagccaccgaggccggtttcaaggccactgtcggcaccctgccaaaaacagtggcg
cgcaaggaagaggccactgtggcactgttcctggtgccgcacgacaaaggcaccaagggg
ccgaagcagttcgtcgaccagcagaacgacgtgaccgcagccggtatcgagctggccacc
cgtgaaggcttcgagtcggtcgagcacgtcaagcgctacaccgcgctgggcttcggtacc
gaccagggcaaactgggcaacatcaacggcctggccatcgccgcccgttcgatcggcatc
accatcccggaaatgggtaccaccatgttccgccccaactacacgccggttactttcggc
gcggtagcgggccgtcactgtggtcacctgttcgagcccgtgcgcttcactgccctgcat
gcctggcacgtgaagaacggcgccgagttcgaagacgtcggccagtggaagcgcccgtgg
tacttcccgaaagccggtgaagacatccatgctgccgtgactcgcgaatgcaaggccgtg
cgcgacagcgtgggcctgctggacgcctcgaccctgggcaagatcgacatccagggcccg
gacgcgcgcgagttcctcaaccgcatctacaccaacgcctggaccaagctcgacgtgggc
aaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtaacc
gcctgcgtcggcgacaaccacttcatcatgaccaccaccaccggcggcgctgcccgcgta
ttgcagtggatggagctgtatcaccagaccgaatggccagagctgaaggtgtacttcact
tcggtcaccgaccactgggccaccatgaccctgtccggccctaacagccgcaagctgctg
agcgagctgaccgacatcgacatggacaaggaagccttcccgttcatgacctggaaggaa
ggcaacgtcggtggcgtgccggcccgcgtgttccgtatctcgttcaccggcgagctgtcg
tacgaagtgaacgtgcaggccaactacgccatgggcgtgctggaacagatcatcgaggcc
ggcaagaagtacaacctgaccccgtacggcaccgagaccatgcacgtactgcgtgcagag
aagggcttcatcatcgtgggccaggacaccgatggttcgatgaacccggacgacctgaac
atgagctggtgcgttggccgcaacaagccgttctcgtggatcggcctgcgtggcatgaac
cgcgaagactgcgtgcgtgagaaccgcaagcagctggtgggcctgaaaccggtcgacccg
accaagtggctgccggaaggcgcccaactggtgttcgacccgaaacagccgatcccgatg
gacatggtcggccacgtcacctccagctacgcgtccaactccctgggctactcgttcgcc
atgggtgtggtcaaaggcggcctcaagcgcatgggcgagcgtgtctactcgccgcaggcg
gatggcagcgtgatcgaggcggaaatcgtgtcttcggtgttcttcgatccgaagggtgag
cggcagaacgtctaa
DBGET
integrated database retrieval system
