Pseudomonas putida KT2440: PP_0914
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Entry
PP_0914 CDS
T00114
Name
(GenBank) GGDEF domain protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PP_0914
Enzymes [BR:
ppu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PP_0914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
FtsL
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AAN66539
UniProt:
Q88PD6
LinkDB
All DBs
Position
complement(1055990..1058071)
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AA seq
693 aa
AA seq
DB search
MPCAWIKETPLKLELRNSLSVKLLRVVLLSALAVGVVLSCAQIIYDTYKTRQAVDSDAQR
ILDMFRDPSTQAVYSLDREMGMQVMEGLFQDESVRMASIGHPNETMLAEKSRPLQDMSMR
WLTDLILGQERTYTTQLVGRGPYSEYYGDLSITLDTSSYGKDFLINAVIIFISGVLRAMA
MGLVLYLVYHWLLTKPLSKIIEHLTQINPDRPSQHQIPLLKGHEKNELGLWVNTANQLLA
SIERNTHLRHEAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCVGLD
DFKGINEQFSYQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELA
QSILDDLEVPFDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQF
YIASVDSEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMV
PPDQFIPLAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRV
VNNLLQAYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYL
KSLPLDKIKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQG
CHEGQGYHYSKPLSARELTHFLKQAQRNRVSVS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcgcatggattaaggaaaccccattgaagctggaattgcggaacagcttgtcg
gtcaagttgctcagggtcgtgctgctgtcggcgctggcggtcggcgtcgtgctcagctgt
gcgcaaatcatctatgacacctacaagacccgccaggccgtggacagcgacgcccagcgc
atcctcgacatgttccgcgatccttcgacccaggcggtttacagcctcgaccgtgaaatg
ggcatgcaggtcatggaaggcctgttccaggacgaatcagtgcgcatggcctccattggc
catcccaacgaaaccatgctggcagaaaagtcccgcccgctgcaggacatgtccatgcgc
tggctcaccgacctcatcctcggccaggagcgcacctacaccacgcaactggtcggccgt
ggaccttacagcgaatactacggcgacctcagcattaccctcgatacctcctcctacggc
aaagatttcctgatcaacgcggtgatcatcttcatatccggcgtgctgcgggccatggcc
atgggcctggtgctttacctggtctaccactggctgctgaccaaaccgctgtcgaagatc
atcgagcacctcacccagatcaaccctgaccgccccagccagcaccagataccgctgctc
aagggccacgagaaaaacgagctgggcctgtgggttaacaccgccaaccagttgctggcc
tcgatcgagcgcaacacccatttgcgccacgaggcggaaaacagcctgcagcgcatggcc
cagtacgacttcctcaccggcctgcccaaccgccagcaactgcagcagcaactggacaag
atcctcgtcgacggcggccgcctgcagcaccgtgtggcagtgctgtgcgttggcctggac
gacttcaagggtatcaacgaacaattcagctaccaggtcggtgaccagttgctgctggcc
ctggccgatcgactacgcgcccacagcggccgcctgggcgctctggcgcggctgggcggc
gaccagttcgccctggtacaggccaatatcgagcagccctatgaggctgccgaactggcg
caaagcattcttgacgacctggaagtaccgttcgacctcgaccacgagcaaatccgcctg
cgcgcgaccatcggcatcaccctcttccccgaagacggtgacagcaccgaaaaactgctg
cagaaagccgaacagaccatgaccctggccaaggcccgctcgcgcaaccgctaccagttc
tatatcgccagcgtcgacagcgagatgcgtcgccgtcgcgaactggaaaaggacctgcgt
gaagccctgccccgcaaccagctgtacctggtgtaccagccacagatcagctaccgcgac
caccgagtggtcggcgtagaggccctgctacgctggcagcacccggaactgggcatggtg
ccacccgaccagttcatccccttggccgagcagaacggcagcatcatcagcatcggcgaa
tgggtgcttgaccaggcctgtcggcaactgcgcgaatggcacgaccagggcttcagcgac
ctgcgcatggcggtcaacctgtctaccgtgcaactgcaccacagcgagctgccacgggtg
gtcaacaacctgctgcaagcctatcgcctaccaccgcgcagcctggaactggaagtcacc
gaaaccggcctgatggaagacatcagcaccgccgcccagcacctgttgagcctgcgccgc
tccggggcgctgattgccatcgacgacttcggcaccggctactcgtccctcagctatctg
aagtcgctgcccctggacaagatcaagatcgacaagagtttcgttcaggacctgctcgac
gacgatgacgacgccaccatcgttcgcgccatcatccagctgggcaagagcctggggatg
caggtgatcgccgagggcgtggaaacggccgagcaggaaacctacatcgtggcccagggt
tgccacgagggccagggctaccactacagcaagcccctttcggcccgtgaactgacccac
ttcctcaaacaagcgcaacgcaaccgggtttcggtgtcctga
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