Pseudomonas putida KT2440: PP_1197
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Entry
PP_1197 CDS
T00114
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppu03009
]
PP_1197 (rimO)
Enzymes [BR:
ppu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PP_1197 (rimO)
Ribosome biogenesis [BR:
ppu03009
]
Prokaryotic type
ribosomal protein modification factors
PP_1197 (rimO)
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AAN66821
UniProt:
Q88NL0
LinkDB
All DBs
Position
complement(1371799..1373130)
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLAEVPDDVKQE
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccaaaagcc
ctggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtaccc
acctacgaggacgccgacgtggtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgaatcgctggaagtgatcggcgaagccatcaaggaaaacggcaaggtgatcgtcacc
ggctgcatgggcgtcgaagaaggcagcatccgtgacgtgcacccaagcgtgttgtcggtc
actggcccgcagcagtacgagcaggtagtcaacgccgttcacgaagtggtgccgccgcgt
caggaccacaacccgctgatcgacctggtgccgccacagggcgtcaagctgaccccgcgc
cactatgcctacctgaagatctccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtcgatgcgcggcaagctggtcagccgcccggtgggtgaagtgctgagcgaggccgag
cgcctggtcaaggccggagtcaaggaaatcctggtgatttcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgagctgtgcgaagcactgagcagcctgggcgcctgggtacgcctgcactatgtgtac
ccttacccgaatgttgacgacgtgatcccgctgatggctgccggcaagatcctgccgtac
ctggacatcccattccagcacgccagcccgaaagtgctcaagtcgatgaagcgcccggcc
ttcgaagaccgcaccctggcacgcatcaagaactggcgcgagcaatgccctgagctggtg
atccgttccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccagtacctg
ctggactggctgaccgaagcccagctcgaccgcgtgggctgcttccagtactcgccggta
gaaggcgccccggccaacgacctgggcctggccgaagtaccggacgacgtcaagcaagag
cgctgggaccgcttcatggcccaccagcaggccatcagtgctgcccgcctgcaattgcgc
atcggcaaggaaatcgacgtgctgatcgacgaagtcgaggaacaaggttcggttggccgc
agcttcttcgatgcaccggaaatcgacggcagcgtgttcatcgatggcgaccatggtttc
aagccaggcgacaaagtgcgttgccgtgtggtggatgccgacgagtacgacatgtgggct
gaacccatctaa
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