Pseudomonas putida KT2440: PP_3989
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Entry
PP_3989 CDS
T00114
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00270
Cysteine and methionine metabolism
ppu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PP_3989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppu03000
]
PP_3989
03032 DNA replication proteins [BR:
ppu03032
]
PP_3989
03036 Chromosome and associated proteins [BR:
ppu03036
]
PP_3989
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppu02048
]
PP_3989
Enzymes [BR:
ppu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PP_3989
Transcription factors [BR:
ppu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PP_3989
DNA replication proteins [BR:
ppu03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PP_3989
Chromosome and associated proteins [BR:
ppu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PP_3989
Prokaryotic defense system [BR:
ppu02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PP_3989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AAN69583
UniProt:
Q88FU3
LinkDB
All DBs
Position
complement(4500015..4501061)
Genome browser
AA seq
348 aa
AA seq
DB search
MSKNGSECLQWAPSESNPDLEQPKLVSLFCGAGGLDLGFIDAGFDVVFAADHDRYAVETY
NHNHPGQRASKVDLLETSPEELYKRSVLEPGFEGAIHGIIGGPPCQGFSRANTARCHSDP
RNQLAVKYADIVNYFYKHSRIKFFLFENVPEILAKKNADFLEMLRARLSKNFVVYEKEIN
SSGFGVAQHRRRYFIAGISKEIKNKAFTFPDATVNNFRTVEDEISGLPHPVYYSRVAGSE
AIPFHPNHWTMKPKSKRFLTGEMPVGGRSFIKLEWKKPSRTVAYGNREIHVHPDGHRRLS
IYEAMKLQGFPDSYRLMGTLSAQVKQISNAVPPPVAAALAKCFKEFLL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatggatcggagtgcttgcaatgggcaccctccgagagtaaccctgacctg
gagcaaccaaagctggttagcctgttttgtggggctggtggattggatctggggttcatt
gatgccggtttcgatgttgttttcgctgctgatcacgatcgttatgctgtggagacgtat
aatcataaccatccaggacaaagggcttcgaaggtcgatctactagagacgtcgcctgag
gaactgtacaagcgctcagtgcttgagccaggctttgaaggagccattcacggcatcata
ggtgggcctccgtgccaaggcttttcaagggctaatacagccagatgtcatagcgatccc
cgaaatcagctcgccgtcaagtatgcggacatcgttaactacttttacaaacactcaaga
attaagttctttttatttgagaacgtccctgaaattttagccaagaagaatgcagatttt
ctggaaatgcttcgcgcaaggctttcaaagaattttgttgtttatgagaaggaaataaat
tcttcgggttttggtgttgctcagcatcgaagaagatactttattgctggaattagcaag
gaaataaaaaataaggcatttacttttcctgatgcgactgttaacaacttcaggacggtt
gaggacgagatatctggtttgccccatccggtttattatagtcgggttgctggaagtgag
gctataccattccaccctaatcattggacaatgaaacctaagtccaaacgatttctgact
ggtgagatgccggttggtggtcgctcgttcattaagttagagtggaaaaaacctagccgg
acggtggcctatggtaacagggagattcatgttcatcctgatggacatagaaggcttagt
atatacgaggcaatgaagctgcagggattcccagacagctatagattgatggggactttg
agcgcccaagttaagcaaatttctaacgctgtgcctccacctgtggcagcagcactggcc
aaatgttttaaagagttccttttgtaa
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