Pseudomonas putida KT2440: PP_4036
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Entry
PP_4036 CDS
T00114
Symbol
pydB
Name
(GenBank) D-hydantoinase/dihydropyrimidinase
KO
K01464
dihydropyrimidinase [EC:
3.5.2.2
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00240
Pyrimidine metabolism
ppu00410
beta-Alanine metabolism
ppu00770
Pantothenate and CoA biosynthesis
ppu01100
Metabolic pathways
Module
ppu_M00046
Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PP_4036 (pydB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PP_4036 (pydB)
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
PP_4036 (pydB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppu04147
]
PP_4036 (pydB)
Enzymes [BR:
ppu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.2 dihydropyrimidinase
PP_4036 (pydB)
Exosome [BR:
ppu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PP_4036 (pydB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidohydro_1
Amidohydro_3
Usp
Motif
Other DBs
NCBI-ProteinID:
AMM02985
UniProt:
A0A140FWK2
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All DBs
Position
4547689..4549128
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AA seq
479 aa
AA seq
DB search
MSLLIRGATVVTHEESYPADVLCADGLIRAIGQNLEPPTDCEILDGSGQYLMPGGIDPHT
HMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQSLLEAFHTWRGWAQKSASDY
GFHVAITWWSEQVAEEMGELVAKHGVNSFKHFMAYKNAIMAADDTLVASFERCLQLGAVP
TVHAENGELVYHLQKKLLAQGMTGPEAHPLSRPSQVEGEAASRAIRIAETLGTPLYLVHI
SSREALDEIAYARGKGQPVYGEVLPGHLLLDDSVYRDPDWTTAAGYVMSPPFRPREHQEA
LWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSRIPNGTAGIEDRMAVLWDAGVNSGRLS
MHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGTRTISAKTHHQQVDFNIFEG
RTVRGIPSHTISQGKVLWADGDLRAEPGAGRYVERPAYPAVYEVLGRRAEHQRPMPVPR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgttgatccgtggcgccaccgtggttacccacgaagagagttaccccgccgat
gtcctgtgtgccgatggcctgatccgtgccatcgggcaaaacctcgaaccgcccaccgac
tgcgagatcctcgacggcagcggccagtacctgatgcctgggggcatcgatccgcacacc
cacatgcagttgccgttcatgggcacggtggccagcgaggacttcttcagcggcaccgct
gcgggcctggctggcggcaccacctcgatcatcgacttcgtcattcccaacccgcagcag
tcgttgctggaggccttccacacctggcgtggctgggcgcagaaaagcgccagcgactat
ggcttccacgtcgccattacctggtggagcgagcaggtggccgaagagatgggcgagctg
gtggccaagcacggggtgaacagcttcaagcatttcatggcctacaagaatgcgatcatg
gccgcggacgataccctggtggccagcttcgagcgttgcctgcaactgggcgcggtgccc
accgtgcatgccgaaaacggcgagctggtgtaccacctgcagaaaaagctgctcgcccag
ggcatgaccgggccggaagcccacccgctgtcgcgcccctcgcaggttgaaggcgaagcg
gccagccgcgccatccgcattgctgaaaccctcggcacgccgttgtacctggtgcacatt
tccagccgcgaggcactggatgaaatcgcctatgcccgaggcaagggccagccggtgtat
ggcgaggtgctgcccggacatctgctgctggacgacagtgtctaccgtgacccggactgg
accaccgccgccggttatgtgatgagcccgccgttccgcccacgcgaacaccaggaggcg
ctgtggcgcggcttgcagtcgggcaacctgcacaccaccgccaccgaccactgctgcttc
tgcgccgagcagaaagccatgggccgcgacgacttcagccgcatccccaacggcaccgcc
ggcatcgaagaccgcatggcagtactgtgggatgccggggtcaacagcgggcgtttgtcg
atgcacgaattcgtcgcgctgacctctaccaacacggcgaaaatcttcaacctgttcccg
cgcaagggcgctatccgcgtgggtgccgatgccgacctggtgctgtgggacccgcagggc
acccgcaccatctccgccaaaacccaccaccagcaggtggacttcaacattttcgaaggc
cgcaccgtgcgcggcatcccaagccacaccatcagccagggcaaggtgctctgggccgat
ggcgacctgcgcgccgagccgggcgcggggcgctatgtggaacggccggcgtacccggcg
gtgtatgaggtgctggggcgccgggccgagcatcagcggccgatgcctgttccgcgctga
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