KEGG   Pseudomonas putida KT2440: PP_4947
Entry
PP_4947           CDS       T00114                                 
Symbol
putA
Name
(GenBank) proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ppu  Pseudomonas putida KT2440
Pathway
ppu00250  Alanine, aspartate and glutamate metabolism
ppu00330  Arginine and proline metabolism
ppu01100  Metabolic pathways
ppu01110  Biosynthesis of secondary metabolites
Module
ppu_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    PP_4947 (putA)
   00330 Arginine and proline metabolism
    PP_4947 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppu03000]
    PP_4947 (putA)
Enzymes [BR:ppu01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     PP_4947 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     PP_4947 (putA)
Transcription factors [BR:ppu03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    PP_4947 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: AAN70514
UniProt: Q88D80
Structure
LinkDB
Position
5630471..5634424
AA seq 1317 aa
MATTTLGVKLDDPTRERLKAAAQSIDRTPHWLIKQAIFNYLEKLEGGATLTELNGHASNP
ADDAGEVQADHSHQCFLEFAESILPQSVLRSAITAAYRRPEQEVVPMLLEQARLSAPLAD
ATNKLAASIAEKLRNQKSVGGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKGTRD
ALIRDKISTGNWQPHLGNSPSLFVNAATWGLLLTGKLVSTHNETGLTSSLTRIIGKSGEP
MIRKGVDMAMRLMGEQFVTGETIAEALANASRFEAKGFRYSYDMLGEAALTEHDAQKYLA
SYEQAIHSIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLLAKQ
YDIGLNIDAEEADRLELSLDLLERLCFEPSLAGWNGIGFVIQAYQKRCPYVIDYVIDLAK
RSRHRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKVYTDVSYVACARKLLAVPEAIYP
QFATHNAHTLSAIYHIAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIADGKLNRPCRVYAP
VGTHETLLAYLVRRLLENGANTSFVNRIADHSISIQELVADPVASIERMGTQEGSIGLPH
PRIPLPRDLYGTERANSAGIDMANEHRLASLSCAMLATAHNDWKAAPLLACAASESAAAP
VLNPADHRDVVGHVQEATVADVDNAIQCALNAAPIWQATPPAERAAILERTADLMEAEIQ
PLMGLLIREAGKTFANAIAEVREAVDFLRYYAVQARNDFSNDAHRPLGPVVCISPWNFPL
AIFTGQVAAALAAGNPVLAKPAEQTPLIAAQAVRLLLEAGIPEGVLQLLPGRGETVGAGL
VGDERVKGVMFTGSTEVARLLQRNVAGRLDNQGRPIPLIAETGGQNAMIVDSSALTEQVV
IDVVSSAFDSAGQRCSALRVLCLQEDSADRVIEMLKGAMAESRLGCPDRLAVDIGPVIDA
EAKAGIEKHIQGMREKGRPVYQVAIADAAEIKRGTFVMPTLIELDSFDELKREIFGPVLH
VVRYNRRNLDQLIEQINNSGYGLTLGVHTRIDETIAKVVETANAGNMYVNRNIVGAVVGV
QPFGGEGLSGTGPKAGGPLYLYRLLSTRPADAIGRHFQQQDGEGTPDRTLHEQLVKPLHG
LKAWAENNQLADLAALCSQFASQSQSGIARLLPGPTGERNSYTILPREHVLCLADNETDL
LAQFAAVLAVGSSAVWVDGEPGKALRARLPRELQAKVKLVADWNKDEVAFDAVIHHGDSD
QLRGVCQQVAKRAGAIVGVHGLSSGDHQIALERLVIERAVSVNTAAAGGNASLMTIG
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggcgactaccacccttggggtcaaactcgacgacccgacccgtgagcgactcaaagca
gctgcgcagtccatcgaccgcacgcctcactggttgatcaagcaagcgatcttcaattac
ctggagaagctcgagggtggtgccaccctgaccgaactcaacggtcatgccagcaacccg
gccgacgatgccggtgaagtccaggccgaccacagccaccagtgcttcctcgaatttgcc
gagagcatcttgccgcagtcggtactgcgctcggcgatcaccgccgcctaccgccgcccc
gagcaggaagtggtgccgatgctgctggagcaggcgcgcctgagcgcgccgctggccgac
gccaccaacaagctggccgcaagcattgccgaaaaactgcgcaaccagaaaagcgtcggc
ggccgtgccggtatcgtccagggcctgctgcaggaattctcgctgtcgtctcaggaaggc
gtggcgctgatgtgcctggccgaagccctgctgcgtatccccgacaaaggtacccgtgat
gcgctgatccgcgacaagatcagtaccggcaactggcagccgcacctgggcaacagcccg
tcactgttcgtcaacgccgccacctgggggctgctgctgaccggcaagctggtcagcacc
cataacgaaaccggcctcacctcctcgctcacccgcatcatcggcaagagcggcgagccg
atgatccgcaagggcgtcgacatggccatgcgcctgatgggtgagcagttcgtcaccggc
gagaccattgccgaagccctggccaacgccagccgtttcgaggccaaaggcttccgttac
tcctacgacatgcttggcgaagccgcactgaccgagcacgacgcgcagaagtacctggcg
tcctacgagcaggccatccactcgatcggcaaggcctcgcatggccgtggcatctatgaa
ggcccaggcatctcgatcaagctgtcggcactgcacccgcgctacagccgggcccagtac
gagcgcgtgatggaagagctgtacccgcgcctgctgtcgctgaccctgctggccaagcag
tacgacatcggccttaacatcgacgccgaagaagccgaccgcctggagctttcgctggac
ctgctcgaacgcctgtgcttcgagccatccctggctggctggaacggcatcggcttcgtt
atccaggcctaccagaagcgctgcccgtacgtgatcgactacgtcatcgatctggccaag
cgcagccgccaccgcctgatgatccgcctggtaaaaggcgcctactgggacagcgagatc
aagcgtgcccaggtcgaaggcctggaaggctacccggtctatacccgcaaggtgtacacc
gacgtgtcctacgtcgcctgcgcccgcaagctgctggccgtgccagaagccatctacccg
cagttcgccacccacaacgcccacaccctgtcggccatctaccacattgccgggcagaac
tattacccgggccagtacgagttccagtgcctgcacggcatgggcgaaccgctgtacgag
caagtggtcggcaagattgccgatggcaagctgaaccgcccgtgccgcgtgtatgcaccg
gtcggcacccatgaaacgctgctggcctacctggtgcgccgcctgctggaaaacggcgcg
aacacctcgttcgtcaaccgcattgccgaccactcgatttccatccaggaactggtcgcc
gacccggtggccagcatcgagcgcatgggtacccaggaaggcagtatcggcctgccgcac
ccacgcattcccctgccgcgcgacctgtatggcaccgaacgggccaactcggccggcatc
gacatggccaatgaacaccgcctggcgtcgctgtcctgcgccatgctggccaccgctcac
aacgactggaaggctgccccgctgctggcctgcgccgccagcgagagcgctgccgcaccg
gtgctgaacccggctgaccaccgcgacgtcgtcggccatgtgcaggaggccaccgttgcc
gacgttgacaacgccatccagtgcgcactgaacgccgcgccgatctggcaggccacccca
ccagccgagcgtgctgccattctggagcgcaccgccgacctgatggaggccgagatccag
ccgctgatgggcctgctcatccgcgaggccggcaagaccttcgccaacgccattgccgaa
gtgcgtgaagccgtggacttcctgcgctactacgcggtgcaggcacgtaacgacttcagc
aacgacgcccaccgcccactgggtcctgtggtgtgcatcagcccatggaacttcccgctg
gcgatcttcaccggccaggtggccgcagccctggctgccggcaacccggtactggccaag
cctgccgagcaaaccccactgatcgccgcccaggccgtgcgcctgctgctggaagctggc
atcccagaaggcgtgctgcagctgctgccgggccgcggtgaaactgtcggtgccggcctg
gtcggagacgagcgcgtcaaaggcgtgatgttcaccggctccactgaagtggcccgcctg
ctgcagcgcaacgtcgctggccgtctggacaaccagggccgcccgatcccgctgatcgcc
gaaaccggcggccagaacgcgatgatcgtcgactcctcggcactgaccgaacaggtcgtg
atcgacgtggtgtcctcggccttcgacagtgccggccagcgttgctcggccctgcgcgta
ctgtgcttgcaggaagactccgccgaccgcgtaatcgagatgctcaagggcgccatggct
gaaagccgcctgggctgcccggaccgcctggccgtggacatcggcccggtgatcgatgcc
gaagccaaagccggcatcgagaagcacatccagggcatgcgcgagaaaggccgcccggtc
taccaagtcgccattgccgatgctgccgagatcaagcgcggcaccttcgtcatgccaacc
ctgatcgagctggacagcttcgacgagctgaagcgcgaaatcttcggccccgtgctgcac
gtggtgcgctacaaccgccgcaatctggaccagctgatcgagcagatcaacaactccggc
tacggcctgaccctcggcgtgcacacccgtatcgacgagaccatcgccaaagtggtggaa
accgccaacgccggcaacatgtacgtcaaccgcaacattgtgggtgcagtggtgggcgtg
cagccgttcggtggtgaaggcctgtctggcaccggcccgaaagccggcggcccgctgtac
ctctaccgcctgctgtcgacccgcccggccgacgccattggccgccacttccagcagcag
gacggcgaaggcacgccggaccgcaccctgcacgaacagctggtaaagccgctgcacggc
ctgaaggcctgggccgagaacaaccagctggccgacctggccgcgctgtgcagccagttc
gccagccagtcgcagagcggcatcgcccgcctgctgccaggcccgaccggcgagcgcaac
agctacaccattctgccgcgtgagcacgtgctgtgcctggccgacaacgaaaccgacctg
ctggcgcagttcgccgcggtactggccgttggcagctcggcggtgtgggttgacggtgaa
ccgggcaaggccctgcgcgcccgcctgccgcgtgagctgcaggccaaggtgaagctggtc
gcggactggaacaaggatgaagtggcgttcgacgccgtgatccaccatggcgactcggac
cagctgcgcggcgtatgccagcaggtggccaagcgtgccggggcgatcgttggggtgcac
gggctgtccagcggggatcaccagattgcgctggagcgcctggtcatcgagcgcgcggtg
agcgtgaacactgcagcggcgggtggtaacgccagcctgatgaccattggctaa

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