Pseudomonas putida DLL-E4: DW66_4878
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Entry
DW66_4878 CDS
T03439
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud00362
Benzoate degradation
ppud00624
Polycyclic aromatic hydrocarbon degradation
ppud01100
Metabolic pathways
ppud01120
Microbial metabolism in diverse environments
ppud01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DW66_4878
00624 Polycyclic aromatic hydrocarbon degradation
DW66_4878
Enzymes [BR:
ppud01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
DW66_4878
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
GAD-like
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AHZ79376
UniProt:
A0A059UXI2
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Position
complement(5354970..5355689)
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPDFSHLGFGAH
DHDLLLNFNNGGLPIGERIIVAGRIVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaggacaacagccgcttcgtgatccgtgatcgcaactggcacccgaaagct
cttacgcctgactacaagacgtccattgcccgttcgccacgccaggcactggtcagcatc
ccgcagtcgatcagcgaaaccaccggcccggacttttcccacctgggcttcggcgcccat
gaccatgacctgctgctgaacttcaacaacggcggcttgccgatcggcgagcgcatcatc
gttgccggccgtatcgtcgaccagtacggcaagcctgtgccgaacaccctggtggaaatg
tggcaagccaacgccggcggccgctaccgtcacaagaacgaccgctacctggcgccgctg
gacccgaacttcggtggcgtcggccgctgcctgaccgaccgtgatggctactacagcttc
cgcaccatcaagccgggcccgtacccatggcgcaacggcccgaacgactggcgcccggcg
cacatccacttcgccatcagcggcccgtcgatcgccaccaagctgattacccagctgtac
ttcgagggtgacccgctgatcccgatgtgcccgatcgtcaagtcgatcgccaacccgcaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaacccgatggactgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgaaaactgctga
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