Pungitius pungitius (ninespine stickleback): 119194583
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Entry
119194583 CDS
T07626
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119194583 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119194583 (esr1)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
119194583 (esr1)
Nuclear receptors [BR:
ppug03310
]
3. Estrogen like
3A. Estrogen receptor
119194583 (esr1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119194583
NCBI-ProteinID:
XP_037304619
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All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MVTWHQNALRFGYRFGPFFNLFILFLTFPLSNVVFNEPSQISQSQREQRDERRARAKTHR
SGFEDESCVRGAGYNQQNIFKVGKRQSPTQSRPVLRARTSTALSELETLSPQHPSPPPRA
HFSEMYPEESRGSGGVATVDFLEGTYDYAAPTPAPTPLYSHSTPGYYSAPLDSHRPPSDG
SLQSLGSGPTSPIVFVPSSPRLSPFLPPPGHHYLETTSTHVYSVPSSQQSVSREVQCATS
DESYSLGESGAGAEAGGFEMAKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHND
YMCPATNQCTIDRNRRKSCQACRLRKCYEVGMMKGGVRKDRGRVLRRDKRRTGLSDRDKA
SKDLEHRAVPSQDGRKRSSSSGGGGSGGGNGSSSGGACGGGKSFLTSMPPDQVLLLLQCA
EPPILCSRQKLNRPYTEVTMMTLLTNMADKELVHMIAWAKKLPGFLQLGLHDQVQLLESS
WLEVLMIGLIWRSIHCPGKLIFAQDLIIDRNEGDCVEGMAEIFDMLLATASRFRLLKLKP
EEFVCLKAIILLNSGAFSFCTGTMEPLHDTSAVQHMLDTITDTLIHHISQSGCSVQQQSR
RQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYDLLLEMLDAHRLHRPDKAGEPWLQA
DGEPLFSTTMNNSSSSGASGGGGGSSSGGSCAGPRVAHEVPIRAPTVLQYGGSPPDCTHV
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggtgacctggcaccaaaacgcactgaggtttggttatcgatttggccccttctttaat
ttgtttatcctgtttttaacctttcccctgtccaacgttgtgttcaatgagcccagccag
atttcccagagtcagcgagagcagagagacgagcgaagagcaagagcgaagactcacaga
agcggatttgaggatgaatcttgtgtgagaggtgccggttacaaccagcaaaacattttc
aaggtaggaaaaaggcagagcccgacgcagagcagaccagtactcagagccaggaccagc
acagccctctccgaactggagaccctctccccgcaacatccctcgcctccaccacgtgcc
cacttcagtgaaatgtatcctgaagagagccgggggtccggaggggtagccactgtggac
ttcctggaagggacatacgactacgctgcgcccacccctgccccgactcctctctacagc
cactccaccccgggctactactctgctcccctggactcccacaggccgccctcagacggc
agcctgcagtccctgggtagtgggcccaccagtcccatagtgtttgtgccctccagcccc
agactcagccccttcttgcccccacccggccaccactatttggaaaccacctcgacgcac
gtctacagtgtaccatccagtcagcagtcagtgtccagagaggtgcagtgcgccaccagc
gacgagtcgtacagtctgggggagtcaggggccggagcggaggccgggggctttgagatg
gccaaagagacgcgtttctgtgccgtgtgcagcgactatgcctcagggtaccactacggg
gtgtggtcctgtgagggctgcaaggccttcttcaagaggagcatccagggtcacaatgac
tatatgtgcccagcgaccaatcagtgtactattgacaggaatcggagaaagagctgccag
gcttgccgtcttagaaagtgctatgaagtgggcatgatgaaaggaggtgtgcgcaaggac
cgcggccgtgtactgcggcgggacaagagacgcactggcctcagtgaccgagacaaggcc
tctaaggacctggagcacagggcggtgccctctcaggacggaaggaagcgcagcagcagc
agcggcggcggcggcagcggcggtggcaacggcagcagcagcggcggcgcttgcggtgga
ggaaagtcgttcctgaccagcatgcctcctgaccaggtgcttctgctgctccagtgtgcc
gagccaccgatactgtgctctcgtcagaagctgaaccgaccctacaccgaggtcaccatg
atgaccctgctcaccaacatggctgataaggagctggtccacatgatcgcttgggccaag
aagcttccaggtttcctgcagctgggcctccacgaccaggtgcaactgctggagagctcg
tggctggaggtgctgatgatcgggctcatctggaggtccatccactgccccggaaaactc
atcttcgcacaggacctgatcatcgacagaaacgaaggcgactgcgtcgagggcatggcg
gagatcttcgacatgctgctggccaccgcttcccgcttccgcttgctcaaactcaaaccc
gaggagttcgtctgcctcaaagcgatcatcttgcttaactccggagccttttctttctgc
acaggcacgatggagcccctccacgacacctcagcggttcagcacatgctggacaccatc
acagacacgctcatacatcacatcagccaatcaggttgctcggtgcagcagcagtcaaga
cggcaggcccagctgctcctcttgctctcccacatcagacacatgagcaacaaaggcatg
gagcatctctacagcatgaagtgcaagaacaaagtgcccctgtacgacctgctgctcgag
atgctggatgctcaccgcctccaccggccagacaaagcaggtgagccgtggctccaggct
gacggagagcctctcttctccaccaccatgaacaacagcagcagcagcggcgccagcggc
ggcggcggcggctcctcctccggtggctcctgtgcaggaccccgagttgcccacgaggtt
ccgatcagagcccccacagtcctgcagtacggagggtcccctcctgattgcacccacgtc
ttatga
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