Pungitius pungitius (ninespine stickleback): 119211565
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Entry
119211565 CDS
T07626
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04210
Apoptosis
ppug04218
Cellular senescence
ppug04620
Toll-like receptor signaling pathway
ppug04621
NOD-like receptor signaling pathway
ppug04622
RIG-I-like receptor signaling pathway
ppug04623
Cytosolic DNA-sensing pathway
ppug04625
C-type lectin receptor signaling pathway
ppug04920
Adipocytokine signaling pathway
ppug05132
Salmonella infection
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119211565 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119211565 (nfkb1)
04218 Cellular senescence
119211565 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119211565 (nfkb1)
04621 NOD-like receptor signaling pathway
119211565 (nfkb1)
04622 RIG-I-like receptor signaling pathway
119211565 (nfkb1)
04623 Cytosolic DNA-sensing pathway
119211565 (nfkb1)
04625 C-type lectin receptor signaling pathway
119211565 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119211565 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119211565 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
119211565 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119211565 (nfkb1)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119211565 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
119211565
NCBI-ProteinID:
XP_037318458
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MLRTRPITRGNQEATGEFGSYMEPGSLRLGVLHAEIAAVSPAGPPTSPQSTFSWQEKKNI
MAADDHYPHPSNQIFDMDSMWDFQPFPPISQTPSLRTVDGPFLQIVEQPKQRGFRFRYGC
EGPSHGGLPGASSEKTSKTYPAVKISNYQGPARVVVQLVTALTPHPQLHAHSLVGKQCDK
GICVTDLQPKDSTISFPNLGILHVTKKNVAKTLEERMVEATRLGYNCGVSIHPDIDVLQG
EVRVPRELTDHQRNVISSVASLQAKEMDLSVVRLMFTAFLPNSDGGFSRRLEPVVSEPIY
DSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFYEEDDSGLTWEAMGDF
SPTDVHRQFAIVFKTPKYRDQNLQKPTSVLVQLKRKSDNETSEPKPFTYHPQIIDKEEVQ
RKRQKTLPNFQDFSGQGGGGLYRGGGGGGGGGGGGRGPAGGGGPGSAGGGGYYHGFSTYN
YGGAGGGGGGGGGFSTGYSAGLGGGGEGAAAIKHASEGNEAADDEHPNDDSGLAVGLSAT
TQLRGPVAGEGPKEGGVEGEEPESATDVQCGVQLEALFQYSVTGDSAFLLATQRQLMSAQ
DEDGDTGLHLAVLHSQKEALRSLTQVVSALPGEEVLNMRNHLYQSPLHLAVITQQREAVE
ALLLAGADPTLTDRHGNTLLHLASRLEGGGGGMVQFLLQHREIRELLEHTNTAGLCAIHL
AVLANQLSSLRELLEGGADVEAQERSCGRTALHLATERDNVSLAGCLLLEGNAKVDSFTF
NGSTPLHIAAGRDSVKLTALLMAAGADPQKENFEPLFFREEDCCNEEKEDEDEGYIPGTT
PLNMAATTQVLELLHGKEYKPKSLQRPFTPAQGDLASLDVDVKQQVCCALESEGCWEKLA
HSLGLGILNTAFGLSPSPAKTLLQSYEVSGGTVRELLEGLRSVGECRALNVLEEVLRHHD
EKEEVLPRPGDRGEEEEEEEEEETQSSDGSRVQDLKADIRIDSGVCDSGVELSTA
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaacccgaccgataacccgaggtaaccaggaagccaccggtgaattcggctcg
tatatggaacctggaagtcttcgcttaggtgtacttcatgcggaaattgctgcagtttca
cccgctggacccccaacttcaccccagtccacgttttcttggcaggaaaaaaaaaacatt
atggctgctgacgaccactaccctcatccctccaaccagattttcgacatggattccatg
tgggacttccaacctttccccccaatttctcagaccccctctctgcggacagtggacgga
cccttcctgcagatagtggagcaaccgaaacaacggggcttcaggttcaggtacggctgt
gaaggtccgtctcacggaggcctgccaggagcctccagcgagaagaccagcaagacctac
cccgccgtcaagatcagtaactaccagggtccggcccgggtggtggtccagctggtgacg
gcgctgaccccccaccctcagctgcacgcccacagtctggtgggaaagcagtgcgacaaa
gggatctgcgtcaccgacctgcagcccaaagactccaccatcagttttcccaacctgggc
atcctccacgtgaccaagaagaacgtggccaagaccctggaggagaggatggtggaggcc
acccggctggggtataactgcggcgtctccatccaccccgatatcgacgtcctgcagggg
gaggtccgagtcccccgagagctcaccgaccaccagcgcaatgtgatcagcagcgtggcg
tctcttcaggctaaagagatggacctcagcgtagtgcggctcatgttcacggcgttcctc
cctaacagcgacggaggtttctccagacgactcgagcccgtcgtgtcggaaccgatctac
gacagcaaggcacctaacgcctccaacctgaagatcgtgaggatggatcggaccgctggc
tgcgtgagcggtggagaggaggtctacctgctctgtgacaaggtccagaaagatgacatc
caggtccggttctatgaagaagatgactcggggttgacctgggaggcgatgggagatttc
tcacctacagatgtccacagacagttcgccattgtgttcaagactccaaagtatcgagac
cagaacctccagaaaccgacgtcagttctcgtccagctgaagaggaagtctgataacgag
accagcgaacccaaacccttcacctatcaccctcagatcatagacaaggaggaggtgcag
aggaagagacagaagacgttgccaaacttccaggacttcagcgggcaaggaggaggtggt
ctgtaccgaggaggaggaggaggaggaggaggaggtggtggtggacgaggtcctgctgga
ggaggaggacctggctctgctggaggaggaggttactaccatggttttagcacctacaac
tatggcggagcaggaggaggaggaggaggaggcggaggtttctccacaggatactcagct
ggtctgggtggaggaggagaaggagccgccgccatcaaacacgcctccgagggcaacgag
gcagcggacgacgaacatccgaacgacgattcggggttggccgttgggctgagcgctaca
acccagctgagaggcccggtggcgggggaggggcctaaggagggaggggttgagggggag
gagccagaatcagccacagatgtgcagtgcggcgttcagctggaggccctgttccagtac
tcggtcactggagactcagccttcctattggccacgcagcgtcagctgatgagcgcacag
gacgaggacggagacactgggctccacctggcggtcctccacagccagaaggaggcgctg
aggagtctgactcaggtcgtctctgctctgcccggcgaggaggtgctcaacatgaggaac
catctctaccagagtcctttgcacctggccgtgatcacacagcagagggaggcagtggag
gcgctgctattggcgggtgccgacccaacgctgacagatcgtcatggcaacacgctgctc
cacctggcgtccaggctggaaggaggaggaggagggatggtgcagtttctactgcagcac
agagagatcagagaactgctggaacacaccaacacagctggtctgtgtgcgatccacctg
gcggtcctggccaatcagctgtcgtctctcagggagctgctggagggcggggctgacgtg
gaggctcaggagcgcagttgcggacggaccgccctccacctcgccaccgagagagacaac
gtgtcgctggccggctgcctgctgctggagggaaacgctaaagtggacagcttcaccttc
aatggctccacccccctgcacattgctgcaggacgagactccgtcaagctgaccgctctc
ctgatggccgcaggcgcagaccctcagaaggagaactttgagccgctcttcttcagggag
gaggactgctgcaatgaagaaaaggaggatgaagatgaaggctacatcccaggaaccact
cctctcaacatggccgccaccactcaggttttggagcttctgcatggtaaagaatacaaa
ccaaaatctctacaaagacccttcacacctgctcaaggcgatctggcgagtctggacgtg
gacgtgaagcagcaggtgtgttgcgccttggagagtgaaggatgttgggaaaaactggct
cacagtctgggcctcgggatcctcaacacagccttcggtctgagcccttctcctgccaaa
acactgctgcagagctacgaggtttcaggcgggacggtcagggaactgctggagggtctc
aggtcagttggcgagtgcagagcgctgaatgtcctggaggaggtgctgcgtcaccacgac
gagaaggaggaggtgctgcctcgccctggcgacaggggggaagaggaggaggaggaggag
gaagaggagacgcaatcgagtgacgggtctcgggttcaggacctgaaggcggacattcgg
attgacagcggcgtctgtgacagcggggtggagctctccacggcgtga
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integrated database retrieval system
