Pungitius pungitius (ninespine stickleback): 119216177
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Entry
119216177 CDS
T07626
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119216177 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ppug04090
]
119216177 (vcam1b)
04091 Lectins [BR:
ppug04091
]
119216177 (vcam1b)
CD molecules [BR:
ppug04090
]
Proteins
119216177 (vcam1b)
Lectins [BR:
ppug04091
]
I-type lectins (Siglecs)
119216177 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
ICAM1_3_5_D2
ICAM_N
C1-set
Ig_5
Ig_4
Receptor_2B4
Ig_C17orf99
Izumo-Ig
REJ
DUF4249
CBM_35
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
119216177
NCBI-ProteinID:
XP_037324549
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MALLTVCSAPLLAAALLMSSWCVRGLNVEVSPRRPLFKLGERWRLVCRVWDCPTMPSVSW
SVPGDRPLGASASSNRTWSVLTFDPIKMEDEGSLLCKVICGEDNKQIRTTVRVYSFPSAP
LIRGQDHLRLGAESTLTCQVSDLHPAEKVTLNWLRGDAVLHSTTGDSGSGSVRSEYRFTP
VELDPGGNITCSATMDLLALPDEDRTKKTTVPLNPLYAPVVKATPPSAWAMAGSALNLTC
AAAGNPEPTVTWSFRPAGGGSEGRGRGRRLVLAAVTLSDAGRYACEARNSEGSGAAEVEV
TVHAAPTNTSLSVSPGTQVTEGQQVTLTCRSDGAPPAALKLRREGVELQRMDPGSSSSSS
SSSSLSFRLSSAQVGDSAHYQCEAANVYGSQQTTSSITVSAHPLQVEVSPGVSLAEKGSG
LVLTCRASRCPHPPVFTWRTDRDRIVLGGTGPVGLSVLRLDDLQLMDEGGYTCEAQCDSV
TRTAASQVHVYAFPSGPVLEDAGPVLLGQEVVRRCNVSNVFWANQMRILWLSGNTTLMSE
TFASSGSLQNVSLALRLPVREDQQNLTCRAELLLEDGKLWRSRRTSVPLQVHYPPRRTSL
SVSPGEEVLEGQQVTLTCRSDGAPPAALVLRRDGEELKRTDSASSSSLSISLSSAQLEDS
AHYQCEASNQHGSQLVSSSVTVSAPPRNTTVLVLPSTVVQEGQNVTICCHTVSFPLSAMV
LKKLTNGMELYSTNGTFLLVNVTARDSGQYQVNVTNDLGYQVKVFSISVRERRASLHPSL
SAVLVPVACVAGGLAVAALLLDYLRRSRKKGFYQLPQSAPISA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctgactgtctgctcggcccctcttctcgcagctgcgctgctgatgtcatcg
tggtgtgttcggggtctgaatgtggaggtttctcccagaaggcctctgttcaagctgggt
gagcgctggcggctggtgtgtcgggtctgggattgtcccacgatgccgagcgtttcctgg
tccgtgccgggggaccgacctctgggggcctcagccagctccaacaggacttggtctgtg
ttgaccttcgaccccataaaaatggaagatgaaggttctctgctgtgtaaagtcatctgt
ggggaagacaataagcagatcaggacgacagtgcgggtttattctttcccatcagcccct
ctgatccgaggccaggaccacctgcgtctgggggcggagtccaccctcacttgccaggtg
tctgatctccacccagctgagaaggtgaccctcaactggctcagaggggacgccgtcctg
cacagcacgacgggggattctggatctggctcagtccggtctgagtacagattcaccccc
gtggagctggacccgggaggaaacatcacctgcagcgccacgatggacctgctggccctg
ccagacgaggacaggaccaaaaagaccactgtccccctaaacccgctctacgccccggtc
gtcaaggcgacgcccccgtcggcgtgggcgatggccggctccgcgctcaacctcacctgc
gccgcggcggggaaccccgagccgacggtcacctggagcttcaggccggcgggcgggggg
tccgaggggaggggccgaggccggcggctggtcctcgcggcggtgaccctgtccgacgcc
ggacgctacgcctgcgaggcccgaaactcggaggggagcggggcggcggaggtggaggtc
accgttcacgctgcgcccaccaacacctccctctccgtgagtccgggcacgcaggtgacg
gagggtcagcaggtgacgttgacctgccgctcggacggagctccgcccgccgcgctgaag
ctgaggagagagggggtggagcttcagaggatggaccccggctcctcctcctcctcctcc
tcctcctcatcgctctcgttcaggctctcctccgcccaggtaggagactccgcccactat
cagtgcgaagccgccaacgtttacggatcccaacaaaccaccagctccatcaccgtctca
gctcaccctctgcaggtggaggtgagtcctggggtctcactagcggagaagggttccggt
ctggtcctcacctgcagagcctccagatgtccccacccgcccgtcttcacctggcggacg
gaccgggaccggatcgtcctcggggggacggggccggttggactgtctgtgcttcgcttg
gacgacctgcagctgatggatgagggaggatacacctgtgaggcccaatgtgactccgtc
accaggaccgctgccagccaggtgcacgtctacgcgttcccgtccgggccggttctggag
gacgctggtcccgtccttctgggtcaggaggtggtgcgccgctgcaacgtcagcaacgtc
ttctgggccaatcagatgaggatcctgtggctgtcggggaacacaacgctgatgtcagag
accttcgcgtcctccggctccctgcagaacgtctctcttgcccttcggctgccggtccgt
gaggaccagcagaatctgacctgcagggccgagctgctgttggaggacggaaagttgtgg
aggtccaggaggaccagcgtccccctgcaggtccattaccctcccaggagaacctccctc
tcagtgagtccgggtgaggaggtgctggagggtcagcaggtgacgttgacctgccgctca
gacggagctccgcccgccgcgctcgtgctgaggagagacggggaggagctaaagagaact
gactccgcctcctcctcctcgctttccatcagcttgtcttccgcccagttagaagactcc
gcccactatcagtgtgaagcctccaaccagcacggatcccaactggtcagcagctccgtc
accgtctcagctcctccgagaaacaccacagtcctcgtcctgccatcaacggtggtccag
gagggacaaaatgtcaccatctgctgccacaccgtcagcttcccgctgtccgccatggtc
ctgaagaaactgaccaatgggatggagctatattcaaccaatggaacattcctgttggtc
aacgtcacggcccgagactctgggcagtaccaggtcaacgtgacaaacgacctcggatac
caggtcaaagtcttcagcatcagcgtcagagagagacgcgccagtctccatccgagtctc
agtgctgtcctcgtccccgtcgcctgcgtagccggcgggctagctgtagccgctctgctc
ctcgactacctgagaagatccaggaagaaaggtttctaccagctgccccagtccgcccct
atttcagcctga
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