KEGG   Pungitius pungitius (ninespine stickleback): 119217428
Entry
119217428         CDS       T07626                                 
Symbol
polq
Name
(RefSeq) DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119217428 (polq)
Enzymes [BR:ppug01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     119217428 (polq)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    119217428 (polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc
Other DBs
NCBI-GeneID: 119217428
NCBI-ProteinID: XP_037326928
LinkDB
Position
Unknown
AA seq 2595 aa
MSTSGPPSKKKSYMGLHHVKKKQCFQAADEPPDGSRLFQKPHIVSGKSSMSKGAPNRGGA
VCPLGESTLALDEEILQVLDAVDPVRPTTANRGARKKPAPPRHSSTQQEARGPGAGDGER
PGWRADCKDLAQRLLFGEDSEEAEYAQRGPKGIQPPPASSCINATSAQGKQLTNSQQAGS
SSNKQQLPSRRKSSPRSGSNVKADPPLDVSRDYILFSPSRLAAATRRAKLQPSFQNQSAS
VLVVPSGLDLSTLSDTLPQPGIAFCAPAGQAEKLLLCNWGLPKAVLACYQKHGVTHMFEW
QAQCLAAGQALQGGNLVYSAPTSAGKTLVSELLMLKRVLETKRKALFILPFVSVAKEKMH
YLRSVFEEAGVRVEGYMGSTSAAGGFAALDVAVCTIEKANSLINRLIEEDNMALLGMVVV
DELHMVGDSGRGYLLELLLTKIRYIAQKQNATGSLSEGVQIVGMSATLPNLALLASWLGA
ELYQTDYRPVPLHEHLKVGRDVYDKSLAVVRRFTPALRVKGDDDHIVSLCYETVSEGRSV
LLFCPSKNWCEKLSDSIAREFYNLRHTDRRGEAEPKPVGLDREGLVDVVAQLRRTPAGLD
PTLQRTVPWGVAFHHAGLTFDERDVLEGAFRQSTIKVLAATSTLSSGVNLPARRVIIRSP
TFNGHLLDPLTYKQMAGRAGRKGVDTIGESVLVCKEAERQKGIILLKGALQPISSCLVRR
EGDGVTTSMLRAILEIIVGGVASTPQDVRSYALCSLLAASIKSNGKKEPTEDTNKGAIEA
CVEWLMENEFISIQKDGQEERYHPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLEND
LHILYLITPLYAEWTTIDWYQFFCQWEQLSSSMKRVAELVGVQEGFLARSVGGKLVAKTE
KQRRQMAVHKRFFTTLVLHDLVNEVPLGAVASKYNCNRGQLQSLQQSASTYAGMVMVFSK
RLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATVA
DVEKALRNAVPFKSSKRAVDESEVEAAERRSLRCVWVSGGRALTEPEAASEIVSEARLLL
QEDLAQLGIRWDPATLPPGAPAAESAAGSGASSASHLGSREARGDAHTDHREGDRVVEGE
RGDTDGHGEASRGRGNSRKVDGAEPDVRQTVNVVQVAGDSEGPGGKQESQERSEQGEKSE
PKEGERSRGGVPVGPGNGPGPERSLTQELAEIVSSPLFGPVAHPLPSSTPTPAPRFRAPA
SRADEHHRVPTGTSDARAAPALAESPAQPGRVKHSKALRKVLHSIQTDKSPRDPVEPSAV
PSVPTTPPGVSDAPDSPRGASPPSVPLFSPEAKRRRLDRREADKFSSPELYAVDEEEAEG
RVKEGEESFGDSFELDTQTERLMVQQPCQREGSGENAGEEMAAAAAEKDTLEGSNARPRF
NISITDSQMELLLDTSPPISPGPGGEDGVKDEGEDESINRSSSFLFDSLYGSSTPCLSPP
RVSGQSDDDDEEEEERDGREFRGTPPSTQERRRSELLANQEAERQEAVQWGESSFNLSEW
GDSLLVGEHFLERQSLLRRSEGSHEAQRPNGEDVPTTGRLPESQREAGRVPTRPATRTTS
PSEYDEDKASEDHGLARGTKHGGGEKGRRGEQLETKEEMNPLLSVNAVLKHGQTQNSTES
SFPCSHGLQEIFDRWPSMSDQPSPNAPTGENAPSLTRALGGGAKRADSPEEQPDPRSAAE
RPGSAGDLIPPTQETPPVTPRVKLTTSSVRSPLIAQPIPRSALRPRTPALAKRPGSLAGH
GNRPAEADSTSDPDHHRRLSPTRGPPAPASSSSSSSPQQRPPSEAGEVSPLQPSQGASLS
SSCSGSFSIVDVASDRRLFDAFINEWKTKERYSLALACEKRELRPTPEEQMGGKPKRASA
AQPKPRGEDGFPVRDSDGLVLIGLSVCWGARDAYYVSLQQEQSKGLSSSLAPPPLDHNLT
VSERLREANGCLTAPATVVVAYDIIEVYKRLVLSCGVSLEGSSEDPKVACWLLDPGSEER
TLPNMVTVHCPEELPLLDGLGNAHAHCPRVRAATESVLVLSVMDHLAGLLDKDGMLGTFR
SVEMPSQVSLAVLELNGMGFSVQESERQKHVMQAKLAALESRAYDLAGHGFSLTSVDDVA
QVLFLELHLPPNGDVGGPKSKKTLGYTRRGAGGRVRLGKQFSTTKDVLEKLRPLHPLPGV
ILEWRRITNALTKVVFPLQREKRYHTTLAMDRIYPIAQTHTATGRVSFTEPNVQNVPKDF
EIYMPTVVGESPPSQDSCHMTSRSGKKRRSVVPPAAAGRAIQGLAFSVSMRHAFVPFSGG
MILAADYSQLELRVLAHLSKDQRLLQVLNGGADVFRCIAAEWKSVDPESVKDDLRQQAKQ
ICYGIIYGMGAKSLGEQMGVEEDDAACYIESFRARYKGINAFLRETVKKCAKSGYVQTLM
GRRRYLPGIADANAHAKAHAERQAVNTTVQGSAADIVKLATVNIQKRLRSAYPAAPLSHR
HARPAGGRLGTHQLGGAYLVLQLHDELIYETTEEDLIQVAQIVKREMESAVKLYVKLKAK
VKAGPSWGNLEDLDI
NT seq 7788 nt   +upstreamnt  +downstreamnt
atgagcacctcaggtcctccttcgaagaagaagagctacatggggctgcaccacgtcaag
aagaagcaatgtttccaagctgctgatgaaccaccagacgggagcaggctgttccaaaaa
ccccatattgtatcaggcaaatcaagcatgagcaaaggcgccccgaaccgaggaggagca
gtgtgtcctctgggagaatccacattggctcttgatgaagaaattctgcaggtgttggac
gccgtagacccggtgaggccaacgacggcaaacaggggtgcgcgtaaaaagccggcacca
ccgcgccacagcagcacccagcaggaggcccgggggcctggtgctggcgacggtgagcga
ccaggatggcgagccgactgcaaagacctcgcacagaggcttctcttcggtgaggactct
gaggaagcagagtatgctcagaggggcccgaagggcatccagcccccaccggcctcctcc
tgcatcaatgcaacgtccgctcagggcaaacagctgaccaacagtcagcaagcaggcagc
tccagcaataagcagcagcttccatccaggagaaaaagctctccacgtagcgggtcaaac
gtgaaggccgatccacccctggatgtatccagggactacatcttgttcagcccgagccgc
ctcgcggccgccacgaggagggccaaactccagccgtcattccagaatcagtccgcctct
gtgctcgtcgtccccagcggtttggacctgagcactctcagcgacactctgcctcagcca
ggcatcgccttctgtgctccggcggggcaagccgaaaagctgctgctttgcaactggggc
ttaccaaaagctgtcctggcgtgctaccagaagcacggcgtgacccacatgttcgaatgg
caggctcagtgcctcgctgccggacaggcgctgcagggagggaacctggtgtactcggcc
cccacaagtgcaggaaaaactctggtgtcggagttgctgatgttgaagcgtgtgctggag
acgaaaagaaaagctctgttcatactgccatttgtctccgtggctaaagagaagatgcat
taccttcggagtgtatttgaagaggcaggagttcgtgtggaggggtacatgggcagcacc
tcggctgctggaggattcgcagcgctggatgtggctgtgtgcactatagaaaaagccaat
tctctcatcaacagactcattgaagaggacaacatggctctactaggtatggtggtggtg
gacgagttgcatatggtcggtgattctggaagaggatacctactggaactgctcttaacc
aaaatccgttacatagcgcagaagcagaacgccactgggtctctctctgagggcgtacag
atcgtaggcatgagcgccaccttgcccaacctcgccctcctggccagctggttgggtgca
gagctttaccagacggactacaggcccgtacccctgcacgagcacctcaaggtgggccgc
gacgtctacgacaagagcctcgccgtggtccggcggttcaccccggcgctccgcgtcaag
ggcgacgatgaccacatagtgagcctgtgctacgagacggtgagcgagggccgctctgtg
ctgttgttctgcccctcaaagaactggtgtgagaaactgtcggacagcatcgcaagagaa
ttctacaacctccgacacaccgaccgccggggcgaagcggagccaaagccggtgggtctg
gatcgggagggactcgtggacgtcgtggcccagttgagacgaactccagctggcttggac
cccaccctccagcgaactgtgccatggggggtggccttccaccacgctggtttgacgttc
gatgaacgcgacgtgttggaaggagcctttcgccagagcaccattaaagtcctggcggcg
acctccaccctctcctcgggggtgaatctcccggctcgcagggtcatcatccgaagcccc
accttcaacggacacctgttggacccgctcacgtacaaacagatggcagggcgggcgggg
agaaaaggagtggacacgataggtgagagtgtgctggtgtgtaaggaggcggagcgtcag
aaaggtatcattctcctcaagggtgctcttcagccaatcagcagctgcctggtgagaagg
gagggagacggagtcaccaccagcatgctgcgagccatcttagagatcatcgtcggaggg
gtggccagcactccacaggatgtgcggtcgtatgctttgtgctcactgctggctgccagc
atcaaaagtaacggcaaaaaagaaccgactgaggacaccaacaaaggagctatagaggcc
tgtgttgaatggctgatggagaacgagttcatcagcatccagaaggacggacaagaggag
cggtaccatcccactcaactcggtgctgccaccctttcctcgtccctttcccctcccgag
gctctgggaatatttgcagatctccaacgggccatgaagggctttgtgcttgaaaacgac
ttgcacattctctacctgatcaccccgttgtacgctgagtggaccaccatagactggtac
cagttcttctgtcagtgggaacagctgtcgtcatcgatgaagagagtggcggagctggtg
ggcgtccaggagggtttcctcgcgagatctgtcggcgggaaactggtcgccaagaccgag
aagcagcgtcgacaaatggctgttcacaaacgctttttcaccacacttgtgctgcatgat
ctggtgaacgaggtgcctctgggagcagtggcatcgaagtacaactgcaatcgtgggcag
ctgcagtccctccagcagtctgcttctacttatgcaggtatggtgatggtgttttccaag
cgcctgggctggcacaacatggagctgctgctgtcccagtaccagaccaggctgagcttc
ggagtccagagggagctggtggacctggtcagggtttccctgctaaacgccacacgagcc
agagcgctgtacgcacagggcctgtgcacggtcgctgaactagcccgggctactgtggct
gatgtggagaaagccctgaggaacgctgtaccatttaagagctcgaagcgcgcggtggac
gagagcgaggtggaggcggccgagcgccggagcctccgctgcgtctgggtcagcggcggc
cgggccctgacggagccggaggccgcctctgagatcgtttccgaggccaggctcctcctt
caggaagacctggcgcagttaggaattcggtgggacccagcaactcttccaccgggggct
cctgctgcggagagcgccgccggttcaggcgcctcgtccgcatcgcatctcggctcacgt
gaagcacggggcgacgcccacacagatcaccgggaaggagaccgggtggtggagggggag
cgtggggacactgacggacacggggaggccagcagaggccgtgggaactccagaaaggta
gacggggcggagccagatgtcagacaaacggtaaacgtagtgcaagtggcaggtgactcc
gagggtccaggcggaaaacaagaatcgcaggaaagatcggagcaaggggagaaatctgag
ccgaaagaaggggagaggagtagagggggggtcccagttggaccgggaaatggtcctggt
cctgaaaggagcctgacgcaggagttggccgagatcgtttccagccccttgtttggacca
gtggcgcatcctctgccctcctctaccccaacgcccgccccccgtttcagagcgccggcg
tcccgagcggacgaacaccaccgagttcctacggggacatcggacgcgcgcgctgccccg
gcgctcgccgagtcacccgcgcaaccggggagagtgaagcactcgaaggccttaagaaaa
gtcctccactccatacaaaccgacaaaagcccccgggatcctgtcgagccctcggcggtt
ccctcggttccaacgactcctcccggtgtctccgacgcgccggactccccccggggcgcc
agccctccctccgttccactgttctcccccgaggcaaagcgccggaggctggaccgcagg
gaggccgacaagttctcgtccccggagctgtacgcggtggacgaagaggaggccgaggga
cgcgtcaaagagggagaggagagtttcggcgacagctttgaattggacacccagacagag
agactcatggtgcagcagccatgccaacgcgagggatcgggggagaacgcgggggaggaa
atggcggccgcagctgctgagaaggacacactcgagggaagtaatgcacggccaagattc
aatatttccatcacagacagccagatggagctcctccttgacaccagccccccgatctct
ccgggtcctggtggggaggacggagttaaagacgaaggtgaagacgagagcatcaacaga
agcagcagcttcctgtttgacagcctgtacggcagctccacgccgtgcctgagcccgccg
cgggtatccggccaatcggacgacgacgacgaggaggaggaggagcgcgatggtcgggag
ttccgaggcacgcctccgtcgacccaggagcggaggcgcagcgagcttctcgccaaccag
gaggcggaaaggcaggaggccgtccagtggggcgagtcctccttcaacctgtcggagtgg
ggcgactcgctgctggtcggcgagcacttcctggagaggcagagcttgctcagacggtcg
gagggaagtcacgaagctcagcgacccaacggcgaggacgttccgaccacggggcggctg
cctgagtcacagcgcgaagccggccgggtaccgacgcggcccgccacgaggaccacgtct
cccagtgagtacgacgaggacaaagccagcgaggatcacggcctcgcacgaggaaccaaa
catggcgggggtgagaagggtcgacgtggggagcaattagagacaaaagaggaaatgaac
cctttgctctcagttaatgccgttttaaaacacggccaaacacagaattccaccgaaagc
tcttttccttgcagccatggtttgcaagagatctttgaccgctggcctagtatgtctgac
cagccctcgccaaacgccccaaccggcgaaaacgctccctccttgacgcgggcgctcgga
ggcggggcgaagcgggccgattctccagaggaacaacccgaccccaggagcgcagcggag
agaccgggctctgctggagatctcattcccccgacgcaggaaacgccgcccgtcaccccc
cgagtcaaactgaccacctcctccgtccggtcgcctctcatcgctcaaccaatcccccgg
tcggccctgcggccgcggacgccggcgctcgcgaagcgccccgggtccctcgccggacac
ggcaatcgtcctgcagaagccgactccacgtcggatcccgaccaccaccgacgcctcagc
cccactcgaggtcccccggctcccgcctcctcctcctcctcctcctccccccagcagagg
cctccctctgaggctggggaggtatctcctctccagccgtcccagggtgcgtccctctcg
tccagctgctccggctcgttctccatcgtggacgtggcgagcgaccggcgcctctttgac
gctttcattaacgagtggaagacgaaggagcgctactctctggctttggcctgtgagaag
cgggagctcaggccgacgccggaggagcaaatgggagggaaacccaagagagcgtcagca
gctcagccaaagccccgcggtgaggacggcttcccggtaagagacagcgacggactggtg
ttgatcggactctctgtctgctggggagcaagagacgcgtactacgtctctctgcagcag
gagcagagcaaagggttgagctctagtctggctccgccccccctggaccacaacttgaca
gtaagcgagaggctgcgtgaggccaacggctgtctgaccgcgccggcaaccgtggttgtc
gcctatgacatcatcgaggtctacaagaggcttgtgttgagctgcggcgtcagcttagag
ggaagcagcgaggaccccaaggtcgcctgctggctgctggaccccggcagcgaggagagg
actctccccaacatggtgaccgtccactgtcctgaagagctgcctctgctggacggcctc
ggaaacgcacacgcgcactgcccccgcgtcagggcggcgaccgagagcgtgcttgtgctg
tccgtcatggaccacctcgcgggcctgctggacaaggacggcatgctaggtacattcaga
agcgtggagatgccctcccaggtgtctctggcagtgttggagttgaacggaatgggcttc
agcgtccaggagtcggaaagacaaaagcacgtgatgcaagccaaactggcggcgctggag
tcgcgggcatacgacctggccggacacggcttctccctcaccagcgtcgacgacgtggca
caggtgctgttcttggagcttcacctgcctcccaacggggacgtgggcggaccgaagagc
aagaagactctgggctacaccaggagaggagcggggggccgggtccgactcggcaagcag
ttcagcaccaccaaggatgttctggagaagctccgccccctgcacccactgcccggtgtc
attctggagtggaggcggatcaccaacgccttgaccaaagtggtgttccccctgcagagg
gagaagcggtaccacaccacactggccatggacagaatctacccaattgcccagacgcac
acggccacaggtagagtcagcttcactgagcccaacgtgcagaacgtccccaaagacttt
gagatctacatgccgaccgtggtgggggagagcccaccgtcgcaagacagctgccacatg
acctccagatccggaaagaagagacgttcggtggtgcccccagctgcagctggccgcgcg
atacaaggcctggccttctccgtcagcatgagacacgccttcgtacctttttcaggcggg
atgatcttggcagcagactattctcagctggagctgcgagtgttggctcacctctccaag
gatcagcgtctcctgcaggtgctgaacgggggggccgacgtgttccgctgcatcgccgcc
gagtggaaaagcgtcgacccggagtcggtgaaggacgacctcaggcaacaggcgaaacag
atctgctacggcatcatctacgggatgggcgccaagtctttgggggagcagatgggcgtg
gaggaggacgacgcggcctgctacatagagagcttcagggcccgatacaaagggatcaac
gcttttctccgagaaaccgtgaagaagtgcgcgaagagcggctacgtccagaccctgatg
ggccgcaggaggtacctgccgggcatcgcggacgccaacgcgcacgccaaagcgcacgcg
gagcggcaggcggtgaacaccacggtgcagggctcggcggcggacatcgttaaacttgcc
acggtgaacatccagaagcgactgcgaagcgcgtaccccgcggctccgctctctcaccgg
cacgcgcggccagccggcggtcggctcgggacgcaccaactcggaggcgcctacttggtc
ctgcagctgcacgacgagctcatctatgaaaccacggaggaagacctcatccaggtcgct
cagatagtgaagagggagatggagtctgcagtaaagctgtatgtgaagctgaaggccaaa
gtcaaggcgggacccagctggggcaatttggaggacctggatatatga

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