Pungitius pungitius (ninespine stickleback): 119219909
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Entry
119219909 CDS
T07626
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04020
Calcium signaling pathway
ppug04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119219909 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119219909 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119219909 (grin2ca)
Ion channels [BR:
ppug04040
]
Ligand-gated channels
Glutamate (ionotropic)
119219909 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
119219909
NCBI-ProteinID:
XP_037331309
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPPPPPLLLLLLLVLCGAPHCSGRPFGVPAPSVNVAVVFSGSAYQ
AEIKGRLSRENFLDLPLEVNPITVLVNNTNPRALLTRICDTLSANRVHGVVFEDNVGSEA
VAQILDFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWD
SFVVITSLYPGYESYVDYVKSFTDTSYFTWELQDVLTFDMSADGMNDVRARRLLQQIDAQ
VLLVYCSHEEAQYLFTMAAESRLVGPGYIWILPSLAVGNPDIPPPESFPVGLIGIITDRW
RMSLRKRVRDGVAIVVKGVQSFRRQRGFVPEGHSDCLNPSRPPAANDTLFRHMLNVTWEH
NDFSFNSNGYLVNPAMIIITLDRERLWDKVGTYEMGIMQMRYPVWPRYGSYLEPVSDYRH
LTVATLEERPFVIVEAVDPQTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDI
LKKLSRTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIID
FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVG
YNRSLVSAKEPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLA
SYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHS
HMVKYNQRGVEDALNSLKTGKLEAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGI
ALQKDSRWKRLIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYM
LLVAMGLSLLVFAWEHLLYWKLRHSVREAERLNFLLAISRGIYSCFNGVEHTDHSGSMPS
PDVTANYTQANMLKMLKTAKDMVSSARVENSLDNATKTIENWSRRGVDNVRLGLPPRVTA
ADVTHGRLPYISSITDNHSPYSQRALTPTFPLHYGDATTTQPLLEKPCVVTRPNALRYTL
PARNAHHLMERTLPISSLSSPHIAMRDPSPSAASNPHHAGRLYVENPARRPTSPFAPYRE
FQVPDIYVEHKGPLRRKFSYPPDCVSRRRRSHGYTFDAADPRARGDYDEPRPCLAELRAN
HLLSNHAPVGAARACAPGHYAGGSASCNSCMKSYLEPEMDDMPLLGKDKLNRRASFLKAT
WGNDRIHQVDETKASTSASSARVDMPDLFPRVVVANPKPNKLYGSLGHNLSCYPLAAEPA
YLDPAHMGSYPYKQKLKYTESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDL
PVYVGPLAQRPAQFYDGSKDVCHLFPCASHCPGNAAMLPRMGDRQVVYHNNMFGACDATG
KREEPGSGGRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctgggctgtttgagcgactccccgtggtggccgccgcccccgcccccg
ccgctgctgctgctgctgctgctggtgctctgcggcgccccccactgctccggccggccg
ttcggggtccccgcgccctccgtcaacgtggcggtggtcttcagcggctcggcctaccag
gcggagatcaaggggcggctcagccgggagaacttcctggacctgccgctggaggtgaac
cccatcaccgtgctggtgaacaacaccaacccgcgggcgctgctcacccgcatctgcgac
acgctgtccgccaaccgcgtgcatggcgtggtgttcgaggacaacgtgggctccgaggcc
gtggcgcagatcttggacttcatctccacgcagacggccgtgcccatcgtggggatcagc
ggcggctccgccgtcgtgctgccgtacaagggcgagggctccaacttcctccagctgggc
tcctccatcgagcagcagatcaacggcatgttcaaggtgatggaggagtacaactgggac
agcttcgtggtcatcaccagcctgtacccgggctacgagagctacgtggactacgtcaag
tccttcacggacaccagctacttcacgtgggagctgcaggacgtgctgaccttcgacatg
tccgccgacggcatgaacgacgtgcgggcgcggcggctgctgcagcagatcgacgcccag
gtgctgctggtctactgctcccacgaggaggcgcagtacctcttcaccatggcggccgag
tcgcggctggtggggcccggctacatctggatcctccccagcctggcggtggggaacccg
gacatccccccgcccgagagcttccccgtgggcctcatcggcatcatcacggaccgctgg
aggatgagcctgcggaagagggtgcgggacggcgtggccatcgtggtgaaaggcgtgcag
agcttcaggagacagaggggcttcgttcccgagggccacagcgactgcctcaaccccagc
aggccgccggccgccaacgacacgctgttcaggcacatgctgaacgtgacgtgggaacac
aacgacttctccttcaacagcaacggctacctggtgaacccggccatgatcatcatcact
ctggaccgagagcgcctgtgggacaaggtggggacctacgagatggggatcatgcagatg
agatacccggtgtggccgcggtacggctcctacctggagccggtgtcggactacaggcac
ctgacggtggccacgctggaggagaggcccttcgtcatcgtggaggcggtggacccgcag
accggcacctgcgtcagcaacaccgtgccctgccgccggcagtccaacaagaccgaaacc
attgtgggtcacaccgagccctacaccaagctgtgctgtaaaggcttctgcatcgacatc
ctgaagaagttgtcccgcaccataaagttctcctacgacctctacctggtcaccaacggc
aagcacggcaagctggtccgaggcatctggaacgggatgatcggagaggtgttctacaag
cgggcggacatggccatcggctcgctgaccataaacgaggagcgctccgagatcatcgac
ttctcggtgccgttcgtggagacgggcatcagcgtgatggttgccaggagcaacggcacc
gtctcgccgtcggccttcctagagccgtacagcccggcggtctgggtgatgatgttcgtc
atgtgtctcaccgtggtggccatcacggtcttcgtctttgagtactgcagtccggtcgga
tacaaccgcagtctggtcagtgccaaagagcccgggggccccaccttcaccatcgggaag
tccgtgtggctgctgtggggcatcgtcttcaacaactcggtgcccatcgagaacccgaag
ggcaccaccagcaagatcatggtgctggtctgggccttcttcgccgtcatcttcctggcc
tcctacacggccaacctggcggccttcatgatccaggagcagtacatcgacaccgtctcc
gggctgagcgacaaaaagtttcaaaagccgcaggagcagtaccccccgttccgcttcggc
acggtcccgaatggcagcacggagcgcaacataaggagcaactaccccgagatgcactcc
cacatggtcaagtacaaccagaggggcgtggaggacgccctcaacagcctcaaaaccggg
aaactggaggccttcatctacgacgccgccgtcctcaactacatggcgggcaaagacgag
ggctgcaagctggtgaccatcggcagcgggaaggtgttcgccaccactggctacggcatc
gccctgcagaaggactcgcgctggaagcgactcatcgacctggccctgctgcagttcctg
gctgatggcgacacccagaagctgcagaccgtctggctcacgggcatctgccgcaacgag
aagaaggaggtgatgagcagcaagctggacatcgacaacatggcgggggtcttctacatg
ctgctggtcgccatgggcctcagcctgctggtgttcgcctgggagcacctgctctactgg
aagctgcgccactcggtccgcgaggcggagcggctgaacttcctcctggccatcagcaga
ggcatctacagctgcttcaacggggtggagcacaccgaccacagcggcagcatgccgagt
cccgacgtcactgccaactacacacaagccaacatgctgaagatgctgaagacggccaag
gacatggtgtcctccgccagggtggagaactctctggacaacgccaccaagacaatagag
aactggagcaggcggggggtggacaacgtgcggctcggcctgcccccccgagtgacggcg
gcggacgtgactcacggccgcctgccgtacatctccagcatcacggacaaccactcgccg
tactctcagagggccctgacccccaccttcccgctgcactacggggacgccaccaccacc
cagcccctcctggagaagccctgcgtggtgacccgacccaacgcgctccgctacacgctg
cccgcccgcaacgcgcaccacctcatggagcggaccctccccatctccagcctgagcagt
cctcacatcgccatgcgggacccgtccccctccgccgcgtccaacccccaccacgccggc
aggctgtacgtggagaacccggcccggcgcccaacgtccccgttcgctccctacagggag
ttccaggtgcccgacatctacgtggagcacaaggggcccctgaggaggaagttcagctac
ccgccggactgcgtcagccggaggaggcggtcccacggctacacgttcgacgccgccgac
ccccgagccagaggcgactacgacgaaccgcggccctgcctcgccgagttgagggccaac
cacctcctgagcaaccacgcccccgtcggcgccgccagggcgtgcgctccgggacactac
gccgggggcagcgccagctgcaactcctgcatgaagtcctacctggagcccgagatggac
gacatgccgctgctggggaaggacaagctcaaccgccgcgcctccttcctcaaggccacg
tggggcaacgacaggatccatcaggtagacgaaacaaaggcctccacctccgcgtcctcc
gcccgcgtggacatgcctgacctgtttcctcgggtggtggtggccaacccgaagcccaac
aagctatacggcagcctgggacacaacctgtcctgctacccgctggctgcagagcctgcg
tacttggacccggcccacatgggctcctacccttacaagcagaagctcaagtacaccgag
tccaccaggctgccctcttacagggaggccatcctgcagaacgccgccgccctgcgccgc
tcctcctccacggtggtgcacagacactactccacctacctgaactcgtacacagacttg
ccggtgtacgtggggccgctggcccagagacccgcccagttctacgacggctccaaggac
gtgtgccacttgttcccctgcgccagccactgcccgggtaacgcggcgatgctgccccgc
atgggggaccggcaggtggtttaccacaacaacatgttcggggcctgcgacgccacgggg
aagagggaggagccgggctccgggggccgagagcggaggcaggtgttggtggcgcgaaga
gtcaacagcccctacgtgccaaagccctggggcagggtgtccagcctggagtccgaggtc
tga
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