Pseudomonas putida HB3267: B479_08300
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Entry
B479_08300 CDS
T02389
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00071
Fatty acid degradation
ppuh00280
Valine, leucine and isoleucine degradation
ppuh00310
Lysine degradation
ppuh00362
Benzoate degradation
ppuh00380
Tryptophan metabolism
ppuh00410
beta-Alanine metabolism
ppuh00640
Propanoate metabolism
ppuh00650
Butanoate metabolism
ppuh00907
Pinene, camphor and geraniol degradation
ppuh00930
Caprolactam degradation
ppuh01100
Metabolic pathways
ppuh01110
Biosynthesis of secondary metabolites
ppuh01120
Microbial metabolism in diverse environments
ppuh01200
Carbon metabolism
ppuh01212
Fatty acid metabolism
Module
ppuh_M00087
beta-Oxidation
ppuh_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
B479_08300 (fadB)
00650 Butanoate metabolism
B479_08300 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
B479_08300 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
B479_08300 (fadB)
00310 Lysine degradation
B479_08300 (fadB)
00380 Tryptophan metabolism
B479_08300 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B479_08300 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
B479_08300 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
B479_08300 (fadB)
00930 Caprolactam degradation
B479_08300 (fadB)
Enzymes [BR:
ppuh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
B479_08300 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
B479_08300 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
B479_08300 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
B479_08300 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
SDH_sah
Motif
Other DBs
NCBI-ProteinID:
AGA72572
LinkDB
All DBs
Position
1860848..1862995
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIQADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSTSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEAQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADATVLDVLKPIVYEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctgaccctgaacgaactg
cgccaggccgtcgatgccatccaggccgacgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatagtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcattttcaacgccttcgaa
gacctcgaagtgccgaccgtcgccgccatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggccgccgactaccgggtcatgtccaccagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggctttggcggcaccgtgcgcctgccgcgcctgatcggt
tcggacaacgccatcgaatggatcgccgccggcaaggaaaaccgtgccgaggacgccctg
aaagtgggggctgtcgacgccgtggtcgcgcctgagctgctgatggccggtgcccttgac
ctggtcaagcgcgccatcagtggcgagctggactacaaggccaagcgccagcccaagctg
gaaaagctcaagctcaacgccatcgaacagatgatggccttcgagactgccaagggcttc
gtcgccggccaggccggcccgaactacccagccccggtcgaagccatcaagactatccag
aaggctgccaacttcggccgtgacaaggccctggaagtcgaagccgcaggcttcgccaag
ctggccaagacctcggttgccgagagcctcatcggcctgttcctcaacgaccaggaactc
aagcgcaaggccaaggcgcatgacgaaatcgcccacgacgtgaagcaggccgccgtgctc
ggtgccggcatcatgggtggcggcatcgcctaccaatcggcggtcaagggcaccccgatc
ctgatgaaggatatccgcgaggaagccatccagctgggcctgaacgaggcctccaagctg
ctcggcaaccgcgtcgagaagggccgcctgaccccggccaagatggccgaggcactcaac
gccattcgcccgaccctgtcctatggtgacttcgccaatgtcgacatcgtcgtcgaggcc
gtggtcgagaacccgaaagtcaagcaggccgtgctggctgaagtggaagcccaggtgaag
gacgatgcgatcctcgcttccaacacctcgaccatttccatcaacctgctggccaaggcg
ctcaagcgcccggaaaacttcgttggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagtccagtgaagtggcggttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtaagcgccggtgtcgac
ttcgtgcgtatcgacaaggtcatggagaagttcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggccgaagggttc
ccggaccgcatgaaggacgagcgccgctcggccgttgacgcattgtacgaggccaaccgc
ctggggcagaagaacggcaagggcttctacgcctacgaaaccgacaagcgcggcaagccg
aagaaggtcgccgacgccaccgtgctcgacgtgctcaagccgatcgtctacgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggtctggtctac
ggcattggtttccctcccttccgcggtggtgcgctgcgctacatcgactcgatcggtgtg
gccgaattcgttgccctggccgatcaatacgccgacctggggccgctgtaccacccgacc
gcgaagctgcgtgagatggccaagaacggccagcgcttcttcaactga
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