Pseudomonas putida HB3267: B479_17615
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Entry
B479_17615 CDS
T02389
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00330
Arginine and proline metabolism
ppuh01100
Metabolic pathways
ppuh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
B479_17615
Enzymes [BR:
ppuh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
B479_17615
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
AGA74415
LinkDB
All DBs
Position
complement(3867108..3869357)
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AA seq
749 aa
AA seq
DB search
MYKDLKFPILIVHRAIKVDSVAGERVRGIAEELRQDGFAVLAAADHAEACLVAATHHGLA
CMLIAAEGVGENTHLLQNMAELIRLARLRAPSLPIFALGEQVTLENAPAEAMSELNQLRG
ILYLFEDTVPFLARQVARAAHIYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHAMVGRDDLVLVDRNCHKSVVHAIIMTGAIPLYLCPERNELGIIGPIPLSEFS
PEAIQAKIQANPLARDRGQRIKLAVVTNSTYDGLCYHAGLIKQTLGASVEVLHFDEAWFA
YAAFHEFFTGRYAMGTACAADSPLVFSTHSTHKLLAAFSQASMIHVQDGARRQLDRDRFN
EAFMMHISTSPQYSILASLDVASTMMEGPAGRSLLQEMFDEALSFRRALANLREHIAADD
WWFSIWQPPSAEGIHRLAAQDWLLQPGAEWHGFGEVADDYVLLDPLKVTLVMPGLSAGGA
LGEHGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRHYDGN
TALSNCLPSVVAADASRYQGMGLRDLCDQLHGCYRANATAKQLKRLFTRLPEVAVSPARA
YDQMVRGEVEAVPIEALLGRVAAVMLVPYPPGIPLIMPGERFTEATRSIVDYLAFARAFN
QGFPGFVADVHGLQNESGRYTVDCIKECE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggacctcaagttccccatcctcatcgtgcaccgcgccatcaaggttgacagc
gtcgctggcgagcgtgtgcggggcatcgccgaggaactgcgccaggacggctttgccgtc
ctcgccgccgccgaccatgccgaggcctgcctggtcgctgccacccaccatggcctggcc
tgcatgctgattgccgccgagggcgtcggcgagaatacccacctgctgcagaacatggcc
gagctgatccgcctggcccgcctgcgcgcccccagcctgccgattttcgccctgggcgaa
caagtaaccctggaaaacgcccccgccgaagccatgagcgagctcaaccagttgcggggc
atcctctacctgttcgaagacaccgtgccgtttcttgcgcgccaggtggcgcgtgccgca
catatctacctggacggcctgctgccgccgttcttcaaggccctggtgcagcacaccgcg
cagtccaattattcctggcacaccccgggccacggcggcggcgtggcctatcgcaaaagc
ccagtgggccaggcctttcaccagttcttcggggaaaacaccctacgctcggacctgtcc
gtttccgtgccggagctgggctcgctgctcgatcacaccggccccttggccgaagccgaa
gccagggctgcgcgcaactttggcgccgaccacacctttttcgtcatcaacggcacctcc
acggccaacaagatcgtctggcacgccatggtcggccgcgacgacctggtgctggtggac
cgcaactgccacaagtcggtggtgcatgcgatcatcatgaccggtgccattcccctctat
ctgtgccccgagcgcaacgaactcgggatcatcggcccgatcccgctcagcgagttcagc
cccgaggcgatccaggcgaagatccaggccaaccctcttgctcgcgatcgcgggcagcgc
atcaagctggcggtggtgaccaactccacctacgacggcctgtgctaccacgccgggctg
atcaagcagaccctgggcgccagtgtcgaggtgctgcacttcgacgaggcctggttcgcc
tatgcggcattccacgagttctttaccgggcgctatgccatgggcacggcctgcgcggca
gacagcccgctggtgttcagcacccattccacccacaagctgctggccgcgttcagccag
gcctcgatgattcatgtgcaggacggggccaggcgccagctggaccgtgaccgcttcaac
gaagcgttcatgatgcacatctcgacctcgccgcagtacagcatcctcgcttcgctggac
gtggcctcgaccatgatggaagggccggccgggcgttcgctgctgcaagaaatgttcgac
gaggcgctgagctttcgccgtgccctggccaacctgcgcgagcacatcgccgccgacgac
tggtggttcagcatctggcagccgccgagcgccgaaggcatccaccgcctggccgcgcag
gactggctgctgcagccgggggcggagtggcatggctttggcgaagtggcggatgactat
gtgctgctcgacccgctgaaggtgacccttgtgatgccgggcctgagcgcgggcggtgca
ctgggcgagcatggcatcccggcggcagtggtcagcaagtttctctgggagcgggggctg
gtggtggagaaaaccggcctgtacagcttcctggtgctgttctccatgggcatcaccaag
ggcaagtggagcaccctgctcaccgagttgctggagttcaagcgccactatgacggcaat
accgccctgagcaactgcctgccgagcgtggtggctgccgatgcctcgcgctatcagggc
atgggcctgcgcgacctgtgcgaccagttgcatggctgctaccgcgccaatgccacggcc
aagcaactgaaacggttgttcacgcgcttgccggaggtagccgtgagcccggcccgggcc
tatgaccagatggtgcgcggtgaggtggaggcggtgccgatcgaggcgctgctggggcgg
gtggcagcggtgatgctggtgccgtacccgcctggtattccgttgatcatgccgggggag
cggtttaccgaggcgacccgctcgatagtcgattacctggccttcgcccgggcgttcaac
cagggcttcccaggtttcgtcgccgacgtgcacggcctgcagaatgaaagcggccgctac
acggtggactgcatcaaggaatgcgaatga
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