Pseudomonas putida HB3267: B479_26854
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Entry
B479_26854 CDS
T02389
Name
(GenBank) tetracycline efflux protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuh02000
]
B479_26854
01504 Antimicrobial resistance genes [BR:
ppuh01504
]
B479_26854
Transporters [BR:
ppuh02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
B479_26854
Antimicrobial resistance genes [BR:
ppuh01504
]
Gene variants
Tetracycline resistance genes
Transporters
B479_26854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
MFS_1_like
LacY_symp
TRI12
PROL5-SMR
Motif
Other DBs
NCBI-ProteinID:
AGA76220
LinkDB
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Position
pPC9:7865..9139
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AA seq
424 aa
AA seq
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MSTNLSVIKNPRVQSDQRRLVRRPDVKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDL
VHSNDVTAHYGILLALYALVQFACAPVLGALSDRFGRRPILLVSLAGATVDYAIMATAPF
LWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMG
GFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAAL
MAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLG
ERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQTMLSRQVDEERQGQ
LQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSGAGQ
RADR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacttatcagtgataaagaatccgcgcgttcaatcggaccagcggaggctg
gtccggaggccagacgtgaaacccaacagacccctgatcgtaattctgagcactgtcgcg
ctcgacgctgtcggcatcggcctgattatgccggtgctgccgggcctcctgcgcgatctg
gttcactcgaacgacgtcaccgcccactatggcattctgctggcgctgtatgcgttggtg
caatttgcctgcgcacctgtgctgggcgcgctgtcggatcgtttcgggcggcggccaatc
ttgctcgtctcgctggccggcgccactgtcgactacgccatcatggcgacagcgcctttc
ctttgggttctctatatcgggcggatcgtggccggcatcaccggggcgactggggcggta
gccggcgcttatattgccgatatcactgatggcgatgagcgcgcgcggcacttcggcttc
atgagcgcctgtttcgggttcgggatggtcgcgggacctgtgctcggtgggctgatgggc
ggtttctccccccacgctccgttcttcgccgcggcagccttgaacggcctcaatttcctg
acgggctgtttccttttgccggagtcgcacaaaggcgaacgccggccgttacgccgggag
gctctcaacccgctcgcttcgttccggtgggcccggggcatgaccgtcgtcgccgccctg
atggcggtcttcttcatcatgcaacttgtcggacaggtgccggccgcgctttgggtcatt
ttcggcgaggatcgctttcactgggacgcgaccacgatcggcatttcgcttgccgcattt
ggcattctgcattcactcgcccaggcaatgatcaccggccctgtagccgcccggctcggc
gaaaggcgggcactcatgctcggaatgattgccgacggcacaggctacatcctgcttgcc
ttcgcgacacggggatggatggcgttcccgatcatggtcctgcttgcttcgggtggcatc
ggaatgccggcgctgcaaacaatgttgtccaggcaggtggatgaggaacgtcaggggcag
ctgcaaggctcactggcggcgctcaccagcctgacctcgatcgtcggacccctcctcttc
acggcgatctatgcggcttctataacaacgtggaacgggtgggcatggattgcaggcgct
gccctctacttgctctgcctgccggcgctgcgtcgcgggctttggagcggcgcagggcaa
cgagccgatcgctga
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