Pectobacterium punjabense: E2566_05850
Help
Entry
E2566_05850 CDS
T06530
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00730
Thiamine metabolism
ppuj01100
Metabolic pathways
ppuj01240
Biosynthesis of cofactors
ppuj04122
Sulfur relay system
Module
ppuj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
E2566_05850 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
E2566_05850 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuj03016
]
E2566_05850 (thiI)
Enzymes [BR:
ppuj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
E2566_05850 (thiI)
Transfer RNA biogenesis [BR:
ppuj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
E2566_05850 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QJA19476
LinkDB
All DBs
Position
1294358..1295806
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
GAIRDALTRIPGIHHILEVEDHSYTDVHNIFEQALALYREQLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTSPQITVNLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRSPDEQD
DKPLELDQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
ggcgcgattcgtgatgcgctgacgagaattccgggtattcaccatattctggaagttgaa
gatcattcctatactgatgtgcacaacatctttgaacaggcgttggcgctgtaccgtgaa
caactggaaggcaagacgttttgtgtgcgggtgaaacgccgcggtaagcatgaatttagc
tcacaggatgtggaacgctatgttggcggcgggctgaatcagcacattgaaacggcgcga
gtcaatctcacttctccgcagatcactgtaaatctggaaatcgagcaggatcgtctgctg
ctgattaaaggccgctatgaagggatcggcggctatccgatcggtacgcaggaagatgta
ctgtctctcatttctggtggtttcgattctggtgtgtccagctacatgttgatgcgccga
gggtgccgcgtgcattactgtttcttcaaccttggcggtgcggcgcacgagattggggtg
aaacaggtggcacattacctgtggaatcgatttggtagttcgcaccgggtgcgttttatt
gctatcgatttcgatcccgttgtcggtgaaattctggagaaggttgacgacggccagatg
ggggttgttttgaagcgcatgatggtgcgtgcggcctccaaaatagctgagcgttatggc
gttcaggcgttggtgaccggtgaagcgctagggcaggtttccagccagacgctgactaac
ctgcgcttgatcgacaatgcttccgataccctgattttgcgcccgctgatttctcatgat
aaagagcacattatcaaacaggctcgcgagctgggaacggaagattttgctaaaacgatg
ccggaatactgcggtgtgatctccaaaagcccgacggtgaaggcggtaaaagcgaagatt
gaggccgaagaagggcattttgatttcgctattctggatcgtgtggtgagcgaagcgcgg
aatattgatattcgtgagatcgccgagcagaccaagcaagacgtggttgaagtcgaaacg
gttgcctcatttgcaccaaccgacgtactgctggatatccgctcgccggatgaacaggat
gataagccgctggagctggatcagatcgaaatcaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagcaaaacctacctgctttactgcgagcgcggcgtg
atgagccgcttgcaggcgctatacctgcgtgagcaaggttttagcaatgtgaaggtctac
cgaccgtaa
DBGET
integrated database retrieval system
