Pectobacterium punjabense: E2566_20675
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Entry
E2566_20675 CDS
T06530
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase RfaF
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00540
Lipopolysaccharide biosynthesis
ppuj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E2566_20675 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
E2566_20675 (rfaF)
Enzymes [BR:
ppuj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
E2566_20675 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
Core region
E2566_20675 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
QJA22151
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All DBs
Position
4535123..4536172
Genome browser
AA seq
349 aa
AA seq
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MKILVIGPSWVGDMMMSHSLYRTLKAEHPEAVIDVMAPAWCRPLLARMPEVNQALAMPLG
HGALELGERRRLGVSLRDAGYDRAYVLPNSFKSALVPFFANIPQRTGWRGEMRYGLLNDV
RVLDKAAFPLMVQRYTALGYDRSRIHRAEDLPQPLLWPQLQVSQTEIADMTQTFDLSDTR
PIIGFCPGAEFGPAKRWPHYHYSALAQSLIERGYQIALFGSANDHSACDDILQGLTEDAR
QYCTNLAGKTSLEQAVVLIAACHAVVSNDSGLMHVAAALHRPLVALYGPSSPDFTPPLSH
QAEVIRLITGYHRVRKGDAEQGYHQSLIDIQPERVLSALDKYLLPGADA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttggtcatcggcccttcctgggtcggcgatatgatgatgtcgcacagcctt
tatcgcacattgaaggctgaacacccggaagcggtcattgacgtgatggcaccggcctgg
tgccgtccgctgctggcacggatgccggaagtcaatcaggcgttagctatgccgctaggg
cacggcgcacttgagctgggggaacgccgccgtcttggcgtatcgctgcgtgatgcgggc
tatgaccgcgcttacgtgttgcccaactcctttaagtctgcgctggtgccgttctttgcc
aacattccgcagcgcacaggctggcgcggcgaaatgcgttatgggctattgaacgacgta
cgcgtgctggataaagccgcctttccgttgatggttcagcgctacaccgcattaggctac
gatcgtagccgtattcatcgtgcagaggatctgccacagccgttgctttggccacagtta
caggtcagccagaccgaaattgcggacatgacgcagacctttgatctcagcgatacacgc
cctatcatcggtttttgccccggtgccgaattcggccctgccaaacgttggccgcattat
cactattcagcattggcgcaatcgctgattgaacgcggctaccagatagcactgttcggt
tcagccaatgaccactcggcctgtgacgatatccttcagggattgacggaagatgcccgg
caatattgcaccaatctggcgggaaaaacctcgctggaacaggccgtggtgctgattgcc
gcctgtcatgctgtcgtcagcaatgactcagggctcatgcacgtcgcggcggcgcttcat
cgtccgcttgtcgcactttacggccccagcagtcccgactttactccgccgttatctcat
caggccgaagtgattcgcctgataaccggttatcaccgagtgcgtaaaggggatgccgag
cagggttatcaccagagtttgatcgatattcagcccgaacgcgtgctcagcgcgctagat
aaatatctgctaccgggagcagacgcatga
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