Pandoraea pulmonicola: RO07_03800
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Entry
RO07_03800 CDS
T03553
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00053
Ascorbate and aldarate metabolism
ppul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
RO07_03800
Enzymes [BR:
ppul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
RO07_03800
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
DUF5386
Motif
Other DBs
NCBI-ProteinID:
AJC23036
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Position
complement(4820763..4822295)
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AA seq
510 aa
AA seq
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MQPGDNVAIVVNDGGLPAGSRFADGLTLVDTVPQGHKVALTDLAQGAPVIRYGVVIGYAA
RALHAGSWVNERNLAMPEAPSLDRLPIANKVPAALPPLEGFTFEGYRNADGSVGTRNILA
ITTTVQCVAGVVEFAVKRIKETLLPQYPNVDDVVALEHTYGCGVAIDAPDAVVPIRTLRN
IATNPNFGGEVMVVSLGCEKLQPERLLPAGSIPIGSADAQGKPDTVCLQDEAHVGFLSMI
DSILATARVHLERLNARRRETVPASELVVGVQCGGSDAFSGVTANPAVGFATDLLVRTGA
TVMFSEVTEVRDGIDQLTSRAATPEVAQAMIREMAWYDAYLERGRVDRSANTTPGNKRGG
LSNIVEKAMGSIVKSGSGPIHGVVSPGDKLDRTRQRGLIYAATPASDFICGTLQLAAGIN
LHVFTTGRGTPYGLAEVPVIKVATRSDLARRWHDLMDVDAGRIATGEATIEDVGWQLFHL
MLAVASGEKTWAERWGLHNALTLFNPAPVT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaggggacaacgtcgccatcgtcgtgaacgatggcggtctgcccgcaggcagc
cgcttcgcggacgggctgacgctcgtcgacacggtgccgcagggccacaaggtcgcgctg
accgatctggcgcagggcgcgccggtgattcgctacggcgtggtgatcggctacgcggcc
cgcgcgctgcacgccggcagttgggtcaacgagcggaatctggcgatgcccgaggcgccg
tcgctcgaccgtctgcccatcgccaacaaggtgcccgccgcactgccgccgctcgagggc
tttacgttcgagggctatcgcaatgccgacggttcggtcggcacgcgcaacattctcgcg
atcacgaccaccgtgcaatgtgtggcgggcgtggtcgagttcgccgtcaagcggatcaag
gagacgttgctgccgcagtatccgaatgtcgacgacgtcgtggcgctcgagcacacctac
ggttgcggcgtggccatcgatgcgccggacgccgtggtgccgatccgcacgctgcgcaac
atcgcaacgaatccgaacttcggcggcgaagtgatggtggtgagtctgggctgcgagaag
ctgcagccggagcggctgctgcccgcgggcagcattcccatcggcagcgcggacgcgcaa
ggcaagcccgacaccgtgtgcctgcaggacgaagcgcacgtcggtttcctgtcgatgatc
gactcgatactcgcgaccgcgcgcgtgcatctcgagcggctcaacgcgcgccgtcgcgag
acggtgccggcgtcggagctcgtggtcggcgtgcagtgcggcggcagcgatgcgttctcc
ggcgtgacggccaaccctgccgtgggcttcgccacggatctgctcgtgcgcacgggcgcg
acggtcatgttctccgaggtcaccgaggtgcgcgacggcatcgatcaactgacctcgcgc
gcggcaacgccggaagtggcccaggcgatgattcgcgagatggcgtggtacgacgcctat
ctcgaacgcggtcgcgtggaccgcagcgcgaacacgacgccgggcaacaagcgcggcggt
ctgtcgaacatcgtcgagaaagcgatggggtcgatcgtgaagtcgggttcggggccgatc
catggcgtggtctcgcccggcgacaagctcgatcgtacgcgccagcgtgggctgatctac
gccgcgacgcccgccagcgacttcatctgcggcacgctgcaactggcggccggcatcaac
ctgcacgtcttcacgaccggacgcggcacgccgtacggactggccgaagtgccggtgatc
aaggtggcgacgcgctcggatcttgcgcgccgctggcacgatctgatggacgtcgatgcg
ggacgcatcgccacgggcgaggccaccatcgaggacgtcggctggcagctcttccatctg
atgctcgccgtggcgagcggcgaaaagacctgggccgagcgttggggtctgcacaacgcg
cttacgctgttcaaccctgcaccggtgacttga
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