Pandoraea pulmonicola: RO07_25060
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Entry
RO07_25060 CDS
T03553
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00362
Benzoate degradation
ppul00624
Polycyclic aromatic hydrocarbon degradation
ppul00627
Aminobenzoate degradation
ppul01100
Metabolic pathways
ppul01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RO07_25060
00627 Aminobenzoate degradation
RO07_25060
00624 Polycyclic aromatic hydrocarbon degradation
RO07_25060
Enzymes [BR:
ppul01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
RO07_25060
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Motif
Pfam:
LigB
DUF2064
Motif
Other DBs
NCBI-ProteinID:
AJC22905
UniProt:
A0A378ZBP7
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All DBs
Position
complement(3935906..3936745)
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AA seq
279 aa
AA seq
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MGKVVGGFLVPHDPVMFVAPTAPAPDIGRRMWNAFAACAERLAALRPSSVVIVGADHYML
FGTTCLPSFLIGTGDVDGPIDGLPGLKRSVIPDSAGLATHIAEYGLERGFDWAVARALTV
DHSVAIPDRLIVQPLRDAGANVGTVPVYLAAGVDPYIRMSRAVALGRQIREAVEAFDDNE
RVVVVGSGGISHWVGTAEMGRVNEVFDREILGYARSCDLQAMTALTDAYILSNGGNGAME
IRNWACAMAALEGARGEIIDYEPVPEWVTGLGFVQLHIC
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggttgtgggcggattcctcgttcctcacgatccggtcatgttcgtggcgccg
acggcgccggcgcctgacatcggcaggcgcatgtggaacgccttcgccgcatgcgcagag
cgcctcgccgcattgcggccgtcgagcgtcgttatcgtcggcgccgaccattacatgctc
ttcggcaccacttgtctgccgagctttctgatcggtaccggtgacgtcgacggtccgatc
gatggacttcccggtctgaagcgatcggtgattccggacagtgccggccttgccactcac
attgcggagtacggcctcgagcgaggcttcgattgggcggtagcgcgagcgctgactgtg
gatcattccgtagccattcccgatcggctgatcgtccagccgttgcgtgatgcgggggcg
aacgtcggaacggtccccgtatacctggctgccggcgtggatccctacattcgaatgtcc
cgggccgtggcgttgggccggcaaattcgcgaggccgtcgaagcgttcgatgacaacgaa
cgtgtcgtcgtggtgggtagcggcggcatcagccattgggtcgggaccgcggaaatgggg
cgagtcaacgaggtcttcgatcgcgagatattgggctacgcgcgatcgtgcgacctgcag
gcaatgacggcattgaccgatgcgtacattctttcgaacggcggcaacggtgcgatggag
attcgcaactgggcgtgcgcgatggcggcgcttgaaggcgcccggggcgaaatcatcgat
tacgagcccgttcccgaatgggtgactggcctcggcttcgttcaattacacatttgctag
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