Pseudomonas putida NBRC 14164: PP4_03520
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Entry
PP4_03520 CDS
T02707
Symbol
soxA
Name
(GenBank) sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00260
Glycine, serine and threonine metabolism
ppun01100
Metabolic pathways
Module
ppun_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PP4_03520 (soxA)
Enzymes [BR:
ppun01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PP4_03520 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PP4_03520 (soxA)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
DAO
HI0933_like
Pyr_redox_3
GIDA
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAN52205
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All DBs
Position
408878..411892
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AA seq
1004 aa
AA seq
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MSQTYRLASGGRIDRSKVLNFTFNGKTYQGYAGDSLAAALLANGVDIVGRSFKYSRPRGI
IAAGTEEPNAILQIGSSEATQIPNVRATQQALYAGLVATSTNGWPNVNNDVMGILGKVGG
SMMPPGFYYKTFMYPKSFWMTYEKYIRKAAGLGRAPLQNDPDSYDYMNQHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDSRETLDGKPAADWVNAVIKELEGLPEVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRHRVHRVRAKRVVLAPGAHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGRKLVLSTNNDHAYRAALDWHDAGLQVVAIADARHN
PRGSLVEEARAKGIRILTSSAVVEAKGSKHVTGARVAAIDVQAHKVTSPGETLECDLIAT
SGGYSPIVHLASHLGGRPVWRDDILGFVPGDAPQKRECVGGINGVYALGDVIADGFEGGV
RAATEAGFKASVGTLPKTVARKEEATVALFQVPHDKGSKGPKQFVDQQNDVTAAGIELAT
REGFESVEHVKRYTALGFGTDQGKLGNINGLAIAARSIGITIPEMGTTMFRPNYTPVTFG
AVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKAGEDIHAAVARECKAV
RDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVT
ACVGDNHFIMTTTTGGAARVLQWMELYHQTEWPELKVYFTSVTDHWATMTLSGPNSRKLL
SELTDIDMDKEAFPFMTWKEGNVGGVPARVFRISFTGELSYEVNVQANYAMGVLEQIIEA
GKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMNPDDLNMSWCVGRNKPYSWIGLRGMN
REDCVRENRKQLVGLKPVDPTKWLPEGAQLVFDPKQPIPMDMVGHVTSSYASNSLGYSFA
MGVVKGGLKRMGERVYSPQADGSVIEAEIVSSVFFDPKGERQNV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacctatcgcctcgccagcggcggccgcatcgaccgcagcaaggtcctgaac
ttcactttcaacggcaagacctaccagggttatgccggtgacagcctggccgccgcactg
ctggccaacggcgtagacattgtcggccgcagcttcaagtattcgcgcccacgcggcatc
atcgctgccggtaccgaagagccgaacgccatcctgcagatcggttccagcgaagccacc
cagatccccaacgtgcgcgctactcaacaagcgctgtacgcaggccttgtcgccaccagc
accaacggctggccgaacgtcaacaatgacgtgatgggcatcctcggcaaggtgggcggc
agcatgatgccgccgggcttctactacaaaaccttcatgtacccgaaatcgttctggatg
acgtacgaaaagtacatccgtaaagcggcaggccttggccgtgcaccgctgcagaacgac
ccggatagctacgactacatgaaccagcactgcgacgtgctgatcgtcggcgccggccct
gctggcctggccgctgcactggctgctgcgcgcagcggcgcccgtgtgatcctggctgac
gagcaggaagagtttggcggcagcctgctcgacagccgcgaaaccctcgacggcaagcct
gccgccgactgggtcaacgccgtgatcaaagagctggaaggcctgccggaagtgaccctg
ctgccacgtgccacggtcaacggctaccacgaccacaacttcctgaccattcacgagcgc
cttaccgaccacctcggcgaccgcgccccgatcggccaggtacgccaccgtgtgcaccgt
gtacgcgccaagcgcgtggtactggcgcccggcgcccacgagcgcccgctggtgtacggc
aacaacgacgtaccgggcaacatgctggctggtgctgtgtccacctacgttcgccgctac
ggcgtggcaccgggccgcaagctggtgctgtcgaccaacaacgaccacgcctaccgcgct
gcgcttgactggcacgacgctggcctgcaagtggtcgccatcgccgacgcccgccacaac
ccacgtggctcgctggttgaagaagcgcgtgccaaaggcatccgcatcctcacctccagc
gccgtggtcgaggccaaaggcagcaagcatgtcaccggcgcccgcgtggcggctattgat
gtgcaggcgcacaaagtcaccagcccaggcgaaacccttgagtgcgacctgatcgcaacc
tccggtggctacagcccgatcgtgcacctggcttcgcacctgggcggtcgcccagtgtgg
cgtgacgacatcctcggcttcgtaccgggcgatgcgccgcagaaacgcgagtgcgtgggc
ggtatcaatggcgtctacgccctcggtgacgtgattgccgatggcttcgaaggcggcgtt
cgcgcagccaccgaggcgggcttcaaggcctctgtcggcaccctgccaaaaaccgtggcg
cgcaaggaagaggccaccgtggcactgttccaggtgccgcacgacaaaggcagcaagggg
ccgaagcagttcgtcgaccagcagaacgacgtgaccgccgcaggtatcgagctggccacc
cgtgaaggcttcgagtcggtcgagcacgtaaaacgctacaccgcgctgggtttcggtacc
gatcagggcaaactgggcaacatcaacggcctggccatcgccgcccgttcgatcggcatc
accatcccggaaatgggcaccaccatgttccgccccaactacacgccggtgacgttcggc
gcggtagcgggccgtcactgtggccacctgttcgagcccgtgcgcttcaccgccctgcat
gcctggcacgtgaagaacggcgccgagttcgaagacgtcggccagtggaagcgcccttgg
tacttccccaaagccggtgaagacatccatgccgccgtggcccgcgagtgcaaggccgtg
cgcgacagcgtgggcctgctggacgcctcgaccctgggcaagatcgacatccagggcccg
gacgcccgtgagttcctcaaccgcatctataccaatgcctggaccaagctggacgtgggc
aaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtaacc
gcctgcgttggcgacaaccacttcatcatgaccaccaccaccggtggcgccgcccgtgtg
ctgcagtggatggagctgtaccaccagaccgaatggccggagctgaaggtgtacttcacc
tcggttaccgaccactgggccaccatgaccttgtccggccccaacagccgcaagctgctc
agcgagctgaccgacatcgacatggacaaggaagccttcccgttcatgacctggaaggaa
ggcaacgtcggcggcgtgccggcccgtgtgttccgtatctcgttcaccggtgagctgtcg
tacgaagtcaacgtgcaggccaactacgccatgggcgtgctggaacagatcatcgaggcg
ggcaagaagtacaacctgaccccgtacggcaccgagaccatgcacgtactgcgtgccgag
aagggcttcatcatcgtgggccaggacaccgacggttcgatgaacccggacgacctgaac
atgagctggtgtgtgggccgcaacaaaccatattcgtggatcggcctgcgtggcatgaac
cgcgaagactgcgtgcgcgagaaccgcaagcagctggtaggcctgaagccggtcgacccg
accaagtggctgccggaaggcgcccagctggtgttcgaccccaaacagccgatcccgatg
gacatggttggccacgttacctccagctacgcgtccaactccctgggctactcgttcgcc
atgggggtggtcaaaggcggcctcaagcgcatgggcgagcgtgtctactcgccgcaggca
gatggcagcgtgatcgaggcggaaatcgtgtcttcggtgttcttcgatccgaagggtgag
cggcagaacgtttga
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