Pseudomonas putida NBRC 14164: PP4_26310
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Entry
PP4_26310 CDS
T02707
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00540
Lipopolysaccharide biosynthesis
ppun01100
Metabolic pathways
ppun01250
Biosynthesis of nucleotide sugars
Module
ppun_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PP4_26310 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppun01005
]
PP4_26310 (hldD)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PP4_26310 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
ppun01005
]
Core region
PP4_26310 (hldD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
DapB_N
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
BAN54484
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All DBs
Position
complement(2985316..2986341)
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AA seq
341 aa
AA seq
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MTIIVTGAAGFIGSNLVQALNQRNETEIIAVDDLTDGDKFRNLADSEIADYLDKDDFLDR
FACGEFGNVRAVLHQGACSSTVEADGRFMMDNNYRFSRELLASAQQQRVPLLYASSAAVY
GAGQDFREERECERPLNVYGYSKFLFDQQVRRQLMTARSQVVGLRYFNVYGPHEQHKGAM
ASVALHCFNQYQSHGKVSLFGSYGDYPGGGHLRDFVSVDDVVKVNMFFLERPQLSGIFNV
GSGRAQPFNDVALAVINRLREQQDQSPLSLEIALLEGVLEYSEFPDHLRGKYQCYTCADL
ERLRAAGYQASTLTVQQGVARYCDWLQGIKSPPPAPFQQTA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtaaccggtgccgcaggattcatcggtagcaatctcgtacaggcgctc
aaccagcgcaacgaaaccgagatcatcgccgtcgacgatctgaccgatggcgacaaattc
cgcaacctggccgacagtgaaattgccgactacctggacaaggacgattttctcgatcgc
tttgcttgtggtgagtttggcaacgtgcgtgctgtgctgcaccagggagcgtgttcaagc
accgtcgaagctgatggacgtttcatgatggataacaattaccggttcagccgtgaattg
ctggcgtctgcgcagcaacaacgggtcccgcttttatatgcgtcatcggcagctgtgtat
ggcgccgggcaggattttcgcgaagaacgtgaatgtgagcgcccgctaaacgtctatggc
tattccaagttcctctttgatcaacaggtacgccggcagttgatgacagccaggagccag
gtcgtcggcttgcgttatttcaacgtctacgggccccatgaacagcataaaggtgcgatg
gcgtcagtggccctgcactgcttcaaccagtaccagtcccatggaaaagtcagcctgttc
ggcagctatggtgactatcccggcggtggccatctgcgtgatttcgtctctgtggatgat
gtggtcaaggtcaatatgttcttccttgagcgcccacagttgagcggtatcttcaatgtc
ggcagtggtcgcgcccagccgttcaatgacgttgccttggctgtgatcaatcggctgcgt
gagcaacaagaccaatcgcccttgtcacttgagattgccttgcttgagggggtgcttgag
tacagcgaatttcctgatcatttgcgtggcaagtaccagtgctacacctgtgctgacctg
gagcgcttgcgcgctgccggttaccaggcgtccacattgaccgtccagcaaggcgtggcc
cgctactgcgactggttgcagggtatcaaaagcccgccgcctgctccgttccagcagacg
gcgtaa
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