Pseudomonas putida NBRC 14164: PP4_43510
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Entry
PP4_43510 CDS
T02707
Symbol
kdsD
Name
(GenBank) D-arabinose-5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00540
Lipopolysaccharide biosynthesis
ppun01100
Metabolic pathways
ppun01250
Biosynthesis of nucleotide sugars
Module
ppun_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PP4_43510 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppun01005
]
PP4_43510 (kdsD)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
PP4_43510 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
ppun01005
]
Lipid A
PP4_43510 (kdsD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DAC
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BAN56204
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All DBs
Position
4931494..4932468
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AA seq
324 aa
AA seq
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MSQSSELIQSAQRTLRLELEAVEALLARIDDNFVKACELILASKGRVVVVGMGKSGHIGN
KIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPLIKRLGIK
LVSLTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTASLVLGDCLAIALLEARGFT
AEDFAFSHPGGALGRRLLLKVENVMHSGDELPQVARGTLLKDALLEMSRKGLGMTVIVEA
DGTLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARAEMLAAEALKIMEDHKIGAL
VVVDREDRPTGALNMHDLLRAGVM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatccagcgagctgatccaatccgcccaacgcaccctgcgcctggaactcgag
gccgtagaggccctgttggcgcgcatcgacgacaatttcgtcaaagcctgcgaactgatc
ctggccagcaagggccgggtggtcgtggtcggcatgggcaagtccgggcatatcggcaac
aagatcgccgccaccctggccagcaccggtacgccggcgtttttcgtgcacccggctgaa
gccagccatggcgacatgggcatgatcacccgcgatgatgtcatccttgccctgtcgaat
tccggtagcactgccgaaatcgtcaccctgctgccactgatcaaacgcctgggcatcaag
ctggtcagcctgaccggcaaccccgattcgcccctggcccaggccgccgaggtcaacctc
gacgcccgcgtagagcaagaggcctgcccacttaacctggcacccacctcttccaccacc
gcatcgctggtgctgggcgactgcctggccatcgccctgctcgaagcccgcggcttcacg
gcagaagactttgccttctcgcacccgggcggtgcactgggccgccgcctgttgctcaag
gtcgagaacgtgatgcacagcggcgacgagctgccccaggtagcccgcggcaccctgctc
aaggatgcgctgcttgaaatgtcccgcaaaggtctgggcatgaccgtgatcgtcgaagcc
gacggcacgctggccgggatcttcaccgacggcgacctgcgccgcagcctggaccgcaac
atcgacgtacacaccaccctgatcgaccaggtgatgaccgtgcacggcaagacggcccgc
gccgaaatgctcgctgccgaagccttgaagatcatggaagaccacaagatcggcgcactg
gtggtggtggaccgcgaggaccgcccgaccggcgccctgaacatgcacgacctgctgcgc
gccggtgtaatgtaa
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