Pseudomonas putida NBRC 14164: PP4_52860
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Entry
PP4_52860 CDS
T02707
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00130
Ubiquinone and other terpenoid-quinone biosynthesis
ppun01100
Metabolic pathways
ppun01110
Biosynthesis of secondary metabolites
ppun01240
Biosynthesis of cofactors
Module
ppun_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PP4_52860 (ubiD)
Enzymes [BR:
ppun01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
PP4_52860 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
BAN57139
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All DBs
Position
complement(5980870..5982336)
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AA seq
488 aa
AA seq
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MQYRDLRDFIRGLEQRGELKRIQVPISPVLEMTEVCDRTLRAKGPALLFEKPTGFDIPVL
GNLFGTPERVAMGMGAESVEELREIGKLLAFLKEPEPPKGLKDAWSKLPIFKKVVSMAPK
VVKDAVCQEVVVEGDDVDLGALPIQHCWPGDVAPLITWGLTVTRGPNKDRQNLGIYRQQV
IGRNKVIMRWLSHRGGALDYREWCEKNPGQPFPVAVALGADPATILGAVTPVPDTLSEYA
FAGLLRGNRTELVKCRGSNLQVPATAEIILEGVIHPGEMAPEGPYGDHTGYYNEVDSFPV
FTVERITHRQKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDEAVTRRIDE
LWDQLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgcgacttgcgcgacttcatccgtggcctggaacagcgcggcgagctcaag
cgcatccaggttccgatctccccagtcctggaaatgaccgaggtctgcgaccgcaccctg
cgtgcgaagggcccggcattgctgttcgaaaagcccaccggcttcgacattccggtgctg
ggcaacctgttcggcacccccgaacgcgtggcgatgggcatgggcgccgagtcggtcgaa
gaactgcgagaaatcggcaagctgctggccttcctcaaggagcccgagccacccaagggc
ctgaaggacgcctggtccaagctgccgatcttcaagaaggtcgtgtcgatggcgccgaag
gtcgtcaaggacgcggtatgccaggaagtggtggtcgagggtgatgatgtcgacctcggc
gcactgccgatccagcactgctggccaggcgacgtggcgccgctgatcacctggggcctt
accgtcacccgcggcccgaacaaggaccgccagaacctgggcatctaccgccagcaggtc
attggccgcaacaaggtcatcatgcgctggctgagccaccgtgggggcgccctcgactat
cgtgagtggtgcgagaaaaaccccggccagccgttcccggttgccgtggccctgggtgct
gacccggcgaccatcctcggtgccgtgaccccggtgccggacaccctctccgaatatgcc
ttcgccggcctgctgcgcggcaatcgcaccgagctggtcaagtgccgtggcagcaacctg
caggtaccggccaccgccgaaatcatcctggaaggcgtgatccacccgggcgaaatggcc
ccggaaggcccgtatggcgaccataccggctactacaacgaagtggacagcttcccggtg
ttcaccgtcgagcgcattacccaccggcagaagccgatctaccacagcacctacacgggc
cggccgccagatgagccggcgattctcggcgtggcattgaacgaagtgttcgtgccgatc
ctgcagaagcagttcccggaaatcaccgacttctacctgccgccggaaggctgctcgtac
cgcatggcggtggtcaccatgaaaaagcagtacccgggccacgccaagcgcgtgatgctg
ggtgtgtggtcgtttctgcgacagttcatgtacaccaagttcgttattgtcaccgatgac
gatatcaacgcccgtgactggaacgatgtgatctgggccatcaccacgcgcatggacccc
aagcgtgatacggtgatgatcgacaacacgccgatcgactacctggacttcgcgtcgccg
gtatcggggctggggtcgaagatgggcctggacgccacgcacaagtggccgggcgagact
acacgcgaatgggggcgggtcatcgtcaaggacgaagccgtcacccgccgtatcgatgag
ctgtgggatcagttgggaatagattga
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