Pseudomonas putida H8234: L483_07920
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Entry
L483_07920 CDS
T02706
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pput
Pseudomonas putida H8234
Pathway
pput00071
Fatty acid degradation
pput00280
Valine, leucine and isoleucine degradation
pput00310
Lysine degradation
pput00362
Benzoate degradation
pput00380
Tryptophan metabolism
pput00410
beta-Alanine metabolism
pput00640
Propanoate metabolism
pput00650
Butanoate metabolism
pput00907
Pinene, camphor and geraniol degradation
pput00930
Caprolactam degradation
pput01100
Metabolic pathways
pput01110
Biosynthesis of secondary metabolites
pput01120
Microbial metabolism in diverse environments
pput01200
Carbon metabolism
pput01212
Fatty acid metabolism
Module
pput_M00087
beta-Oxidation
pput_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
L483_07920 (fadB)
00650 Butanoate metabolism
L483_07920 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
L483_07920 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
L483_07920 (fadB)
00310 Lysine degradation
L483_07920 (fadB)
00380 Tryptophan metabolism
L483_07920 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
L483_07920 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
L483_07920 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L483_07920 (fadB)
00930 Caprolactam degradation
L483_07920 (fadB)
Enzymes [BR:
pput01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
L483_07920 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
L483_07920 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
L483_07920 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
L483_07920 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
SDH_sah
Motif
Other DBs
NCBI-ProteinID:
AGN78450
LinkDB
All DBs
Position
1721522..1723669
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIQADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSAFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIASGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPIVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgcctgaccctgaacgagctt
cgccaggccgtcgacgccatccaggccgacgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaatcgcatcttcagtgccttcgaa
gacctcgaagtgccgaccgttgctgccatcaacggcatcgccttgggcggcggcctggaa
atgtgcctggccgccgactaccggatcatgtcctccagcgccaagattggcctgcccgaa
gtcaaactgggcatctaccccggctttggcggcaccgtgcgcctgccgcgcctgatcggt
tcggacaacgctatcgagtggatcgcctccggcaaggaaaaccgtgccgaggacgccttg
aaagtgggcgctgtcgacgccgtggtcgcccctgagttgctgcaggccggtgccttggac
ctgatcaagcgggccatcagcggcgagctggactacaaggccaagcgtcagccgaagctg
gaaaagctcaaactcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gttgccggccaggccggcccgaactatccggccccggtcgaagccatcaagaccatccag
aaggcagccaacttcggccgcgacaaggccctggaggtcgaagccgcaggctttgccaag
ctggccaagacgtcggttgccgaaagcctcatcggcctgttcctgaacgaccaggaactc
aagcgcaaggccaaggcgcatgacgagattgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggcatcgcttaccagtcggcggtcaagggcaccccgatc
ctgatgaaggatatccgcgaggaagctatccagctgggcctgaacgaggcctccaagctg
ctcggcaaccgcgtcgagaagggccgcctgaccccggccaagatggccgaggcactcaac
gccattcgcccgaccctgtcctatggcgacttcgccaatgtcgacatcgtcgtcgaagct
gtggtcgagaacccgaaggtcaagcaagctgtgctggctgaagtggaaggccaggtgaag
gacgacgcgatcctcgcttccaacacctcgaccatctccatcaacctgctggcaaaagcg
ctcaaacgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgatccgtggtgagaagtccagtgaagtggcggtggccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgattgcccgggctttttggtc
aaccgcgtgctgttcccgtatttcggcggctttgccaagctggtcagtgccggtgtcgac
ttcgtgcgcatcgacaaggtcatggaaaagttcggctggccaatgggcccggcttacctg
atggacgtggttggcattgataccggccaccacggccgtgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgaccgccgctcggccgtcgacgcgctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagcgcggcaagccg
aagaaggtcttcgatgccaccgtgctcgacgtcctcaagccgatcgtgttcgaacagcgt
gaagtcaccgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcattgtcgaaaccgccgccgaagccgacatgggcttggtctat
ggcattggtttccctccgttccgcggtggtgcgctgcgctacatcgactcgatcggcgtg
gccgaattcgtcgcactggccgatcagtacgccgatctggggccgctgtaccacccgact
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
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