Pseudomonas sp. UW4: PputUW4_04716
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Entry
PputUW4_04716 CDS
T02357
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuu03016
]
PputUW4_04716 (trmA)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PputUW4_04716 (trmA)
Transfer RNA biogenesis [BR:
ppuu03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PputUW4_04716 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Methyltransf_12
Cons_hypoth95
MTS
RrnaAD
DREV
Methyltransf_15
Met_10
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
AFY21906
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All DBs
Position
5402659..5403738
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AA seq
359 aa
AA seq
DB search
MTFDSQAYAVQLEEKVTRLRDLLAPFDAPEPAVFDSPLKNFRLRAEFRLWREAGERHYAM
FSQEDKRTPILIEEFPIASLRINQLMPQLKAAWQASAALSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHAAASKLATDLNVSIIGRSKGKREVIGHDYVVEQLDVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYDALGDRADDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHRISRCAMFDQFPWTHHMESGVMLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgattcccaggcctatgccgttcaactcgaagagaaggtcacgcgtttgcga
gacctgctggccccgttcgatgcacccgagccggccgttttcgattcgccgctgaaaaac
ttccgcctgcgcgccgagttccgcctgtggcgtgaggccggcgagcggcattacgcgatg
ttttcccaggaagacaaacgtacgcccatcctgatcgaagagttcccgattgccagcctg
cgcatcaaccagttgatgccgcagctcaaggcagcgtggcaagccagtgcggccctgagc
cacaagctgttccaggtggaattcctgaccacgctggccggcgacgcaatgatcactctg
tgctatcaccgcccgctggacgagcactggcacgcggcggcttcgaaactggcgacggac
ctgaacgtcagcatcatcggtcgctccaagggcaagcgcgaagtcatcggtcacgattac
gtggtcgagcaactggacgtcggcggccgcaccttcagctaccgccagccggaaggcgcg
ttcacccagcccaacggtacggtgaaccagaagatgctcaactgggcatacgatgcgctc
ggggatcgcgcagatgatttgctggaactgtattgcggcaacggcaacttcaccctgccc
ctcgccacccgcgtacgcaaggtgctggccaccgaaatcagcaagacctcggtcaacgcg
gcgctgagcaatctcagcgaaaacgcggtggataacgtcaccctggtgcgcttgtccgcc
gaagagctgaccgaagccctgaacgaagtgcgtccgttccgccgcctgcacggcatcgac
ctcaagagctacgagttcggcagcgtgttcgtcgacccgccccgcgccggcatggacccg
gacacctgcgagctgacccggcgcttcgacaacatcctgtacatctcctgcaatccggag
actctggcagccaacatcgcccaactgcacgacacccaccgcatcagccggtgtgcgatg
ttcgaccagttcccgtggacccatcacatggaatccggagtgatgctgacccggcgttga
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