KEGG   Pseudomonas sp. UW4: PputUW4_04830
Entry
PputUW4_04830     CDS       T02357                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu00740  Riboflavin metabolism
ppuu01100  Metabolic pathways
ppuu01110  Biosynthesis of secondary metabolites
ppuu01240  Biosynthesis of cofactors
ppuu02024  Quorum sensing
Module
ppuu_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PputUW4_04830 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PputUW4_04830 (ribD)
Enzymes [BR:ppuu01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PputUW4_04830 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PputUW4_04830 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam STAS
Other DBs
NCBI-ProteinID: AFY22020
UniProt: K9NRX2
LinkDB
Position
complement(5524047..5525180)
AA seq 377 aa
MTTPAELAILDAHFMARALELARKGHYTTDPNPRVGCVIVQGGQIVGEGWHERAGEPHAE
VHALRAAGEQARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGL
QRLAQAGIATESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWIT
GPAARSAVQRLRAQASVVLTGADTVLADNARLTVRADELGLDAEQTALAMSRPPLRVLVD
GRLRVPLDAPFFKAGPALVATCVAVEEQYANGPECLIVPGYDGQVDLRQLLVELANRGVN
EVLVEAGPRLAGAFAQLGLVDEFQIFIAGKFMGSSARPLLDWPLAQMKDAPELKITEIRA
VGDDWRVIAIPVPAASV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaccacgcccgcagaacttgccatcctcgatgcccatttcatggcccgtgccctggaa
ctggcgcgcaaggggcattacacaacggaccccaacccacgtgtaggttgcgtgatcgtg
cagggtgggcagattgtcggcgaaggctggcacgagcgcgccggcgagcctcacgccgag
gttcacgccttgcgcgcggccggtgagcaggcgcgtggcgcgaccgcttatgtgacgctt
gaaccttgcagccaccacggccgcacgccgccctgtgccgatgcgctggtgaatgccggt
gtggcccgcgtggtcgcggcgatgcaggacccgaacccggaagtcgccggtcgcggtttg
caacgcctggctcaggccggtatcgccaccgaaagtggtgtgctggagggcgaagcgcga
aagctcaaccaaggtttcctcaagcgcatggagcacggcttgccgttcgtgcgggtcaag
ctggccatgagcctcgacggtcgcacggcgatggaaagcggcgaaagccagtggattacc
ggtccggcagcacgctcggcggtgcaacgcctgcgcgcccaggccagcgtggtgctgacc
ggcgccgacacggtgctggcggacaacgcgcggttgaccgtgcgtgccgatgagctcgga
ctggacgccgaacaaaccgcactggccatgagccggccgccgctgcgtgtgctggtcgat
ggccgcctgcgcgtaccgctggatgcgccgttcttcaaggccggcccggcgctggtcgcc
acctgcgtggcggtggaagagcagtacgccaacggcccggaatgcctgatcgtgcccggc
tacgatggccaggtcgacctgcgtcagctgctggtcgaactcgccaaccgtggcgtcaac
gaggtgctggtcgaggccggtccacggctggcgggtgctttcgctcagcttgggttggtg
gacgaattccagatattcatcgccggcaagttcatgggttcttcggcgcggccgctgctg
gactggccgctcgcgcaaatgaaggatgcgccggagctcaaaatcaccgaaattcgtgca
gttggcgatgactggcgagtcatcgccatcccagtgccagcagcgagcgtataa

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