Pseudomonas putida W619: PputW619_3903
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Entry
PputW619_3903 CDS
T00675
Name
(GenBank) Cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00260
Glycine, serine and threonine metabolism
ppw00270
Cysteine and methionine metabolism
ppw00450
Selenocompound metabolism
ppw01100
Metabolic pathways
ppw01110
Biosynthesis of secondary metabolites
ppw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PputW619_3903
00270 Cysteine and methionine metabolism
PputW619_3903
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PputW619_3903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppw04147
]
PputW619_3903
Enzymes [BR:
ppw01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
PputW619_3903
Exosome [BR:
ppw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PputW619_3903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACA74383
UniProt:
B1JCV7
LinkDB
All DBs
Position
complement(4335230..4336402)
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AA seq
390 aa
AA seq
DB search
MSDKPRNFATRTIHAGEQFSVADNAIFPPIYTASSYIKRSLDDNPEYAYSRVGNPTRHAY
ESCVAALEEGVGAVACASGVNATATVLELLPKDAHVVVMNGVYGGTFRILEDYRARTSGL
TTTYVDLNDIAAVAAAIKPETQLIWIESPTNPLLHLVDIKAVCDLARARGILTCIDNTFC
SPWNQRPITLGVDLVMHSASKYIGGHSDLTGGVVVAANDALLGRLRKISMAVGAIQGPFD
CYLALRGLKTLDVRMERQCANALQVARFLESHPQIEQVYYPGLESHPQHALCKRQMRAGG
AVVAMKVKNGDRAALNRLVEALQIFVLADSLGGVESMINHSWSMSHNSLSPEQKGVMGIS
ESLLRLSIGIEDYRDLIEDLDGALNASAAV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaagccgcgcaatttcgccacccgtaccatccacgccggtgagcagttcagt
gtcgccgacaacgcgatcttcccgcctatctacaccgccagttcgtatatcaagcgcagc
ctcgatgacaaccccgagtacgcctacagccgcgtgggcaacccgacccggcatgcctat
gaaagctgtgtcgcggcgcttgaagagggtgttggcgcggtggcctgtgcctccggtgta
aacgccaccgccacggtgctggagctgctccccaaggacgctcatgtggtggtgatgaac
ggtgtctacggcggcaccttccgcattcttgaagactaccgcgcacgcacctcgggcctt
accaccacctatgtcgacctcaacgatatcgcggccgtagcggcggcgatcaaacccgaa
acccagctgatctggatcgagtcgccgaccaacccgttgctgcacctggtcgacatcaag
gcggtctgcgacctggcacgggcgcgtggcattctcacctgcatcgacaacaccttctgc
tcgccgtggaaccagcggccgatcaccctcggtgtggacctggtgatgcattcggccagc
aaatacattggcggccactccgacctgaccggcggcgtggtggtggctgccaatgacgcc
ttgctggggcgcctgcgcaagatcagcatggccgtcggggcaatccagggtccgttcgac
tgttacctggctttgcgtggcctgaagaccctcgacgtgcgcatggagcgtcagtgtgcc
aatgccctgcaggtggcacgctttctggaaagccatccgcagatcgagcaggtgtattac
ccgggcctggagagccacccgcagcacgcgctgtgcaaacgccagatgcgcgctggcggg
gcggtggtggcaatgaaggtcaagaacggtgaccgggcggcgctcaatcgcctggtggag
gcattgcagatctttgttctggccgactcgctgggcggcgtggagagcatgatcaaccac
tcctggagcatgtcgcacaactcactgagccccgagcagaagggggtgatggggatcagt
gagagcctgttgcggctgtcgatcgggatcgaggattaccgggatctgatcgaagacctg
gacggggctttgaacgcatcagctgctgtgtaa
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