Pseudomonas putida DOT-T1E: T1E_3546
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Entry
T1E_3546 CDS
T02181
Symbol
soxA
Name
(GenBank) Sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00260
Glycine, serine and threonine metabolism
ppx01100
Metabolic pathways
Module
ppx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T1E_3546 (soxA)
Enzymes [BR:
ppx01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
T1E_3546 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
T1E_3546 (soxA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
DAO
Pyr_redox_3
GIDA
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
NAD_binding_9
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFO49382
UniProt:
I7BYY4
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All DBs
Position
complement(3891035..3894049)
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AA seq
1004 aa
AA seq
DB search
MSQTYRLASGGRIDRSRVLNFTFNGKTYQGYAGDSLAAALLANGVDIVGRSFKYSRPRGI
IAAGTEEPNAILQIGSSEATQIPNVRATQQALYAGLVATSTNGWPNVNNDVMGILGKVGG
SMMPPGFYYKTFMYPKSFWMTYEKYIRKAAGLGRAPLQNDPDSYDYMNRHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDTRETLDGKPAAEWVNAVVKELEGLPEVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRHRVHRVRAKRVVLAAGAHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGRKLVLSTNNDHAYRAALDWHDAGLQVVAIADARHN
PRGSLVEEARAKGIRILTSSAVVEAKGSKHVTGARVAAIDVQAHKVTSPGEVLECDLIAS
SGGYSPIVHLASHLGGRPVWRDDILGFVPGDAPQKRECVGGINGVYALGDVIADGFEGGV
RAATEAGFKATVGTLPKTVARKEEATVALFLVPHDKGTKGPKQFVDQQNDVTAAGIELAT
REGFESVEHVKRYTALGFGTDQGKLGNINGLAIAARSIGITIPEMGTTMFRPNYTPVTFG
AVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKAGEDIHAAVTRECKAV
RDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVT
ACVGDNHFIMTTTTGGAARVLQWMELYHQTEWPELKVYFTSVTDHWATMTLSGPNSRKLL
SELTDIDMDKEAFPFMTWKEGNVGGVPARVFRISFTGELSYEVNVQANYAMGVLEQIIEA
GKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMNPDDLNMSWCVGRNKPFSWIGLRGMN
REDCVRENRKQLVGLKPVDPTKWLPEGAQLVFDPKQPIPMDMVGHVTSSYASNSLGYSFA
MGVVKGGLKRMGERVYSPQADGSVIEAEIVSSVFFDPKGERQNV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacctatcgcctcgccagcggcggccgtatcgaccgcagcagggtcctgaac
ttcaccttcaacggcaagacctaccagggttatgccggtgacagcctggccgccgcgttg
ctggccaacggcgtcgacattgtcggccgtagcttcaagtactcgcgcccgcgcggcatc
atcgccgccggtaccgaagagccgaacgccatcctgcagatcggctccagcgaagcaacc
cagatccccaacgtgcgcgctacccagcaggcactgtacgcgggccttgtcgccaccagc
accaacggctggccgaacgtcaacaacgacgtcatgggcatcctcggcaaggttggcggc
agcatgatgccgccgggcttctactacaaaaccttcatgtaccccaaatcgttctggatg
acttacgagaagtacatccgtaaagccgccggcctgggccgtgcgccgctgcagaacgac
cctgacagctacgactacatgaaccggcactgcgacgtgctgatcgtcggcgccggccct
gctggcctggctgccgcactggccgctgcgcgcagcggtgcccgcgtgatcctggctgac
gagcaggaagagttcggcggcagcctgctcgacacccgcgaaaccctcgatggcaagcct
gctgccgagtgggtcaacgccgtggtcaaagagctggaaggcctgccggaagtgaccctg
ctgccacgtgccacggtcaacggctaccacgaccataacttcctgaccattcacgagcgc
ctcaccgaccacctcggcgaccgcgccccgatcggccaggttcgccaccgcgtgcaccgc
gttcgcgccaagcgcgtggtactggctgccggcgcccacgagcgcccgctggtgtacggc
aacaacgacgtgccgggcaacatgctggccggtgctgtttccacctatgttcgccgctat
ggcgtggccccgggtcgcaagctggtactgtcgaccaacaacgaccacgcctatcgcgcc
gcgctggactggcacgacgcgggcctgcaagtggtcgccatcgccgacgcccgccacaac
ccacgtggctcgctggttgaagaagcgcgtgccaaaggcattcgcatcctcacctccagc
gccgtggtcgaggccaaaggcagcaagcacgtcaccggcgcccgtgtggcggcgattgat
gtgcaggcacacaaagtcaccagcccaggcgaagtcctcgagtgcgacctgatcgcgtcc
tcgggcggttacagcccgatcgtgcacctggcttcgcacttgggcggtcgcccggtatgg
cgtgacgatatccttggcttcgtgccgggcgatgcgccgcagaagcgtgagtgcgtcggt
ggtatcaacggcgtgtatgccttgggcgatgtgattgccgatggcttcgaaggcggcgtc
cgcgcagccaccgaggccggtttcaaggccactgtcggcaccctgccaaaaaccgtggcg
cgcaaggaagaggccaccgtggcactgttcctggtaccgcacgacaaaggcaccaagggg
ccgaagcagttcgtcgaccagcagaacgacgtgaccgcagccggtatcgagctggccacc
cgtgaaggcttcgagtcggtcgagcacgtcaagcgctacaccgcgctgggcttcggtacc
gaccagggcaaactgggcaacatcaacggcctggccatcgccgcccgttcgatcggcatc
accatcccggaaatgggtaccaccatgttccgccccaactacacgccggtgacgttcggc
gcggtagcgggccgtcactgtggtcacctgttcgagcccgtgcgcttcactgccctgcat
gcctggcacgtgaagaacggcgccgagttcgaagacgtcggccagtggaagcgcccgtgg
tacttcccgaaagccggtgaagacatccatgctgccgtgactcgcgagtgcaaggccgta
cgcgacagcgtgggcctgctggacgcctcgaccctgggcaagatcgacatccagggcccg
gacgcgcgcgagttcctcaaccgcatctacaccaacgcctggaccaagctcgacgtgggc
aaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtaacc
gcctgcgtcggcgacaaccacttcatcatgaccaccaccaccggcggcgctgcccgcgtg
ctgcagtggatggagctgtatcaccagaccgaatggccagagctgaaggtgtacttcact
tcggtcaccgaccactgggccaccatgaccctgtccggccctaacagccgcaagctgctg
agcgagctgaccgacatcgacatggacaaggaagccttcccgttcatgacctggaaggaa
ggcaacgtcggtggcgtgccggcccgtgtgttccgtatctcgttcaccggcgagctgtcg
tacgaagtgaacgtgcaggccaactacgcgatgggcgtgctggaacagatcatcgaggcc
ggcaagaagtacaacctgaccccgtacggcaccgagaccatgcacgtactgcgtgcagag
aagggcttcatcatcgtgggccaggacaccgatggttcgatgaacccggacgacctgaac
atgagctggtgcgttggccgcaacaagccgttctcgtggatcggcctgcgtggcatgaac
cgcgaagactgcgtacgtgagaaccgcaagcagctggtgggcctgaaaccggtcgacccg
accaagtggctgccggaaggcgcccaactggtgttcgacccgaaacagccgatcccgatg
gacatggtcggccacgtcacctccagctacgcgtccaactccctgggctactcgttcgcc
atgggtgtggtcaaaggcggcctcaagcgcatgggcgagcgtgtctactcgccgcaggcg
gatggcagcgtgatcgaggcggaaatcgtgtcttcggtgttcttcgatccgaagggtgag
cggcagaacgtctaa
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