Pseudomonas putida DOT-T1E: T1E_5443
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Entry
T1E_5443 CDS
T02181
Symbol
yfiQ
Name
(GenBank) pimeloyl-CoA synthetase
KO
K24012
acetate---CoA ligase (ADP-forming) [EC:
6.2.1.13
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00010
Glycolysis / Gluconeogenesis
ppx00620
Pyruvate metabolism
ppx00640
Propanoate metabolism
ppx01100
Metabolic pathways
ppx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
T1E_5443 (yfiQ)
00620 Pyruvate metabolism
T1E_5443 (yfiQ)
00640 Propanoate metabolism
T1E_5443 (yfiQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppx01004
]
T1E_5443 (yfiQ)
Enzymes [BR:
ppx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.13 acetate---CoA ligase (ADP-forming)
T1E_5443 (yfiQ)
Lipid biosynthesis proteins [BR:
ppx01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
T1E_5443 (yfiQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_5
Succ_CoA_lig
CoA_binding_2
CoA_binding
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
AFO51264
UniProt:
I7CHA7
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All DBs
Position
5928285..5930405
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AA seq
706 aa
AA seq
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MSTPDTLSALLSPRSIALVGASDNPTRIGGRPLRYLRASGYDGAVFPINPNRDNVQGMRA
YTSIADLPQVPDVALLAVPAAATVDAVIACAERGVGSAIVFSAGFAETSEQGRLLQQQIT
GIARDSGMRVLGPNCLGVFNAQRGYYGTFSAIFDAGFVAPGPLAIVSQSGAYGSHLAHLA
RQRGLGINYWVTTGNECDVDVAEALDWIVGQPQVKVVMAYAEGIRDGQRFLAALDKARRN
QVAIVFMKVGRSTVGAHAVSSHTAALSGSDAVFDAVLRQYGVYRARTTNEQLDVAYAASR
GRFIDGNRLGIFTLSGGFGIQMADDAEDAGLAVTAMPDAAQKALKGLLPYASPNNPVDAT
AQALTDLPLMSRFIRAMLDKGSYDLFAAILGSGPASPTFADSLRQAMAEATQGSPNCIKC
LTMSAPDDIVRSYEAQGFLVYADGSALINALGALVRFRQHFDLAARFAALQPPVAQFSLP
QRAISEHEAKSLLRRAGIPFPAEQLVAVDQDPAAAARRLGFPLVMKISSADLPHKTEVGG
VCLRLTDVQQVRKSMAEMLETVRGKAPDAHIEGVTLAPMISGGVETIVGVFSDPTMGPVV
MFGLGGVFVEVLKDVTFRVAPFDQHEALRMIREIRGFAMLEGVRGAAPADIDALARLLVQ
LSRFAAAHAGQFSSIDLNPVVVMPRGQGVLALDALIIPPVSPEPIA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcccgatacgctgtcagcgctgctttcaccccgttcaatcgccctggtgggc
gcgtccgacaacccgacgcggattggtggccgcccgctgcgctatctgcgcgccagcggc
tacgacggagcggtttttccgatcaatcccaaccgcgacaatgtgcagggcatgcgcgcc
tacacatccatcgccgacctgccgcaggtgcctgatgtggcgctgctggcagtgccggcg
gcggccaccgtcgacgcggtgatcgcctgcgccgaacgcggtgtgggctcagcgatcgtg
ttctcggcaggcttcgccgaaacctctgagcagggccggctcctgcaacagcagatcaca
ggtattgcccgcgattcgggcatgcgcgtactggggcctaattgcctgggcgtgttcaat
gcgcagcgcggttactacgggaccttctcggcgatcttcgatgccggtttcgtcgcccct
gggccgctggccatcgtttcgcaaagcggcgcctatggctcgcacctggcgcacctggcg
cggcagcgcgggctgggcatcaactattgggtgaccaccggcaacgagtgtgatgtggac
gtggccgaggcactggactggatcgtggggcaaccgcaggtgaaggtggtgatggcctat
gccgaggggatccgcgatggccagcgcttcctcgccgcgctggacaaggcgcgacgcaat
caggtggcgatcgtgttcatgaaggtgggccgctcaacggtcggtgcccatgccgtcagc
tcgcacacggcggcgctgtccggttctgacgcggtgttcgacgcggtgctgcgccagtac
ggggtatatcgtgcgcgcaccaccaacgaacagctggatgtggcctatgctgcctcgcgc
gggcgcttcattgacggtaaccgcctgggtatcttcaccctgtcgggcgggttcggcatc
cagatggccgatgacgccgaggacgcggggttggcggtgaccgccatgccggacgctgcc
cagaaggcgctgaaggggctgctgccctatgcctcgccgaacaacccggttgatgccact
gcccaggcgctgaccgacctgccgctgatgagccgattcatacgcgccatgctcgacaag
ggtagctacgacctgttcgccgcgattcttggcagcgggccggcgagcccgacgttcgcc
gactcattgcgccaggccatggctgaagccacccaaggcagcccgaattgcatcaagtgc
ctgaccatgtcggcaccggatgacatcgtgcgcagttacgaagcgcaggggttcttggtc
tatgccgatggtagcgcgctgatcaatgcgctgggggcgctggtgcgcttcaggcagcat
tttgatctggctgcccggtttgccgcgctgcaaccgccagtggcgcagttcagcctgccg
cagcgtgcgatcagcgagcacgaggcgaagtcgctgctccggcgcgcgggtatcccgttt
cctgcggagcagttggtcgctgtcgatcaagacccagcggcagcggcacgcaggctgggc
ttcccgttggtgatgaagatttcctctgcggacctgccacacaagaccgaagtgggcggc
gtatgcctgcgtcttaccgatgtacagcaggtgcgcaagagcatggccgagatgctcgaa
accgtgcgcggcaaagcgccagatgcgcatatcgagggcgtcaccctggctccgatgatc
agtggcggggtggagactattgtcggcgtgttcagcgacccgaccatggggccggtggtg
atgttcggccttggcggcgtgttcgtcgaggtgctcaaggacgtgaccttccgcgtggcg
cctttcgaccagcacgaggcactgcgaatgatccgcgagatccgcggtttcgcgatgctc
gagggggtgcgtggcgcggcgccggcggacatcgacgcgttggcgcggctgctggtgcag
ctgtcgcgcttcgcggcggcgcacgccggacaatttagcagcatcgacctcaatcctgtc
gtggtgatgccgcgtggccagggcgtacttgcgctcgacgcgctgatcatcccgcccgtt
tcgcctgagcccatagcctga
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