Paenibacillus polymyxa E681: PPE_00134
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Entry
PPE_00134 CDS
T01319
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PPE_00134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppy03021
]
PPE_00134
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_00134
Transcription machinery [BR:
ppy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PPE_00134
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PPE_00134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Mnd1
BUD22
Motif
Other DBs
NCBI-ProteinID:
ADM68032
LinkDB
All DBs
Position
167429..167980
Genome browser
AA seq
183 aa
AA seq
DB search
MSTPLNLKIDPEKVHETPMVDLAFMVLKAANTPYYYRDLMKEVAKLRGFSDEEINDVIAQ
LYTEINIDGRFACVGTNLWGLKRWYPVDKSEDALTGAKRPRIINDEDDDDEDDYHEEEET
YNSDDDFDADSEDEDGEDELFDGEEDDDDSDEDVVIDDEDLSDEEDSEDENDDESTEDDD
SLR
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccccgctcaacttgaagattgacccggaaaaagtccacgagactccaatggtg
gatttggcatttatggtattgaaagcagccaatactccgtattattaccgtgacctgatg
aaggaagtcgccaaattgcgtggcttttccgacgaagaaattaatgacgttattgctcag
ctatatactgaaatcaacattgacgggcgttttgcctgtgtcggtacgaatctgtggggc
ttgaaacgttggtatccggtagataaatccgaagatgccctgacaggagccaagcgtcct
cgtattattaacgacgaagacgatgacgatgaagatgactatcatgaggaagaagaaaca
tacaactctgatgacgacttcgatgcagatagcgaagacgaggatggcgaagatgagctg
ttcgacggagaagaagatgatgatgatagtgatgaagacgtggttatagacgatgaagac
ctcagtgatgaggaagattcagaagatgaaaatgacgatgagtcgacggaagacgacgat
tcgcttcgttag
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