Photinus pyralis (common eastern firefly): 116162459
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Entry
116162459 CDS
T07438
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116162459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116162459
Enzymes [BR:
ppyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116162459
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116162459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
IGR
DUF4422
Motif
Other DBs
NCBI-GeneID:
116162459
NCBI-ProteinID:
XP_031331938
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MFQFSKNDMMRVKHYDPDRLEFSLFTDDDIKKLSVTKIASPLTFDALGYPLPGGLYDRLM
GPVNSNSEQCKTCCKNFNYCPGHFGYIDLPLPVVNPVFHKVLASILKIACLHCFHVQISP
QVKYCLWLQIKLLNYGFTTEAIEIEIKFQDVFLNPIGKDGTAHMEQIKEYEKLIENSSVQ
LHDRVLNNKNMEGLRNDFINSKMKMPIGKKCMHCHQPITKLQVARNRIVISTSVGGGVKS
NRPKYMAPEESRSYLRKIWDHEKDFVREIVPALSGLTIPYPTDTFYFTVIPVTPPNTRPA
NVLQGRVVESTQSQIYKDILNTSLLLRIIIQVVQHKGDVDVLSVEAKGMYTTAYGSSPIE
KLNNSWESLQMNVDSLIDHTREKGSGEGLKQIIEKKEGLIRMHMMGKRVNFSARSVITPD
PNLNIDEIGVPEAFAKHLTYPVPVTPWNVTEMRKMISNGPNVHPGAVQVEFEDGTIRKIN
PRDASQQESIVKRLLTPDDKGTGFTGVKKVHRHLCNGDVLLLNRQPTLHKPSIMAHTARI
LKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEGYNIAHVCNQYLVPKDGTPLS
GLIQDHVISGVRLSLRGRFFAKHDYQQLVFQAVSFRTDDIVTLPPAILKPTPLWSGKQVL
STVILNVIPRDRQAINLKSVAKISPKAWQNATPRAWRGGGTPFVNDSDMSEAEVVIRGGE
LLVGVLDKTHYGATPFGLVHCIYELYGGTYATKLLSSFAKLFTSFLQHDGFTLGVHDILI
LPDADKKRRKVIKRLRKLGNSVMTVALDLPKNAETDDILETAARASAGNVNIKAIVDREY
KAVLDPFTNDINKACLPAGLICKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKR
PPVMISGKSLPSFPIFEFSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRS
GYLQRCLIKHLEGLTVGYDLTVRDSDQSVIQFLYGEDGMDVTKTQFLNSKQIEFLKENCG
AIINRGVVKQMEKEIAKVNDLIEQQTLWRTSNGDVLQKRRRSPFTIFSTTVKDKINVSNE
NKCSRRTGRSKLSKNIVKLWENADEELKFGFKKYCERSPDPLNSIEQPDATFGALSEQLQ
SLIAKHSYYNKKKDKEFQRMVRYKAMQSLCAPGEPVGLLAAQSIGEPSTQMTLNTFHFAG
RGEMNVTLGIPRLREILMMASKNPKTPSMEVPFLNVPNQEKRAEHLRRILTRVTVADVLE
KIEVVVRQETEPVRQMKYRLRFNFLPHELYSSKYNIKPKGVLKHMTKKYFAQMFTLLKRQ
TKMVTNVVVMGKDKGSRNKDDDDDDDVPEPTQPKVEDSDDSGDEPEDTEDAKLVTKYEQA
NDDQENEEEVKSDDDEEVSEPDDAVADHQEVVDSYVYAQNYVFDKKKYLWCELTFALPLT
HKKLDMTSILRDVANKSVIFETPNIKRAITYIKDNTLILRTDGINITEMFKYNDLLDLNK
LYSNDIHKFGETYGIEAATKVVVKEVQEVFKVYGITVDPRHLLLIADYMMFNGTFEPLSR
RGMSSSASPFQQMSFEASLNFLKLATVNAKRDNLQNPSSCLVLGKPCHSGTGAFKLLQRM
QLAKC
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaatttagtaaaaacgacatgatgcgtgtcaagcactacgatccggatcggttg
gaattctccctcttcacagatgacgacataaagaagctttccgttaccaaaattgcctca
ccgctcaccttcgatgccctaggttaccccttaccgggaggcctttacgaccgtctgatg
ggacccgtcaactcgaacagcgagcagtgcaaaacgtgctgcaagaacttcaactactgc
ccgggtcacttcggttacatcgacctgccgttacccgtcgtaaatccggtcttccacaaa
gtgctcgcttccattctgaagatcgcctgtctccattgctttcacgtacagatttcaccg
caagtcaaatactgcctgtggttgcagattaagctgctcaactacggatttacgacagag
gcgatcgagatcgagataaagtttcaggatgtttttttgaacccgattggcaaggatggt
accgcgcatatggagcagattaaggagtacgaaaagttaattgaaaacagttcggtgcaa
ctccacgatcgtgtcctgaacaacaagaacatggagggtttacgaaacgacttcataaat
tcgaaaatgaaaatgccaatcgggaaaaagtgcatgcactgtcaccaacccataacgaaa
ctacaagtggcccgaaaccgtatcgtaatctcgacgtcggtaggcggcggtgtcaagtcg
aaccggccgaagtacatggcgcccgaggagtcaaggagttacctgcgaaaaatctgggac
cacgagaaggatttcgtgcgtgagatcgtccccgccctgtctggcttgaccattccgtat
ccgaccgataccttttattttaccgttattccggtaacgccgccgaataccaggccggcg
aacgtacttcaaggtcgcgtggtcgaaagcacgcagtcgcaaatctacaaggacatctta
aacacctcgttactcctccggataatcatacaggtcgtgcaacacaagggtgatgtcgac
gtgctctcggtcgaagcgaagggaatgtacaccaccgcgtacgggtcgtctcccatcgag
aagctgaacaactcctgggagagtctgcagatgaacgtcgactcgctaatcgaccatacg
agggagaagggctcgggcgagggcctgaagcagatcatcgagaagaaggagggtttaatt
cgcatgcacatgatggggaagagggtcaacttttcggcgcgttcggtcatcacgcccgat
cccaacttgaacatcgacgagatcggcgtgcccgaagcgttcgccaagcacctgacctat
ccggtaccggtcaccccgtggaacgtcacggagatgcgaaagatgatcagcaatggcccg
aacgtacatcctggagctgtacaggtggagttcgaagacggaacgattagaaaaatcaat
ccgcgtgacgcgagccagcaggagagtattgtaaagcgtcttcttacaccggacgataag
gggacgggttttaccggtgtgaaaaaggtccaccgacatctctgcaatggcgacgtcttg
ctcttgaatcgtcagccgactttacacaaaccgagtatcatggcgcacaccgcccgcatt
ctcaaaggcgagaaaactctaaggctgcactacgccaactgcaaggcgtacaacgccgat
ttcgacggtgacgaaatgaacgcgcacttcccgcagaacgagctcgcgcgcagcgaaggt
tacaacatcgctcacgtctgcaatcaatatctggtaccgaaagacgggacgcccctcagc
ggcctaatccaagatcacgtgatatccggcgtgagactttccctgcgcggccgcttcttc
gccaagcacgactaccagcagctcgtcttccaggccgtctcgttcagaaccgacgacatc
gtcacgctgccgcccgcgatccttaaaccgacgccgctctggtcggggaaacaggtcctc
tcgaccgtaattctcaacgtgattccgcgcgatcgtcaggcgattaacctgaagtcggtc
gcgaagattagcccgaaggcgtggcagaacgcgacgccgcgagcttggagaggaggggga
acgccgttcgtgaacgattcggatatgtccgaggcggaggtggtgatacgcggcggtgag
ctattggtgggcgtgctcgataagactcactatggcgccacccctttcgggctggttcac
tgcatctatgagctttacggcggaacgtacgcgaccaagctgctcagttcgttcgcgaag
ctgttcacctccttcctgcagcacgacggtttcaccttgggcgttcacgacattctcata
ctgcccgacgccgacaaaaagcgtcgcaaggtaatcaaacggctgcgcaagctgggcaac
tccgtgatgacggtcgcgctggatctgccgaagaacgccgaaacggacgacatcctcgag
acggcggcgcgggcgagcgccggtaacgtgaacataaaggcgatagtcgatcgcgagtac
aaggcggttttggatcccttcaccaacgacatcaataaggcctgtttgcccgcaggttta
atatgcaagtttccctacaacaacctgcagctaatggtccagtcgggagcgaaagggtcc
accgtcaatacgatgcagatctcgtgcctgctcgggcagatcgagctggaggggaaacgt
ccgcccgtaatgatttcgggaaagagcctacccagctttccaatcttcgagttcagccct
cgcgcgggcggtttcatcgacggccgctttatgaccggcatacaaccgcaggaatttttc
tttcactgcatggccggtcgtgagggtctaatcgatacagcggtcaagaccagtcgcagt
ggttacttgcagcgttgccttattaagcatctcgagggtctaacggtcggctacgacttg
accgtgcgcgatagtgatcagtcggtaattcagtttctgtatggggaagacggaatggac
gtgaccaagacccaatttttgaatagcaaacaaatcgagtttctcaaggagaactgtggc
gccatcattaatagaggggtggtgaaacagatggaaaaggaaatcgcgaaagtgaacgat
ctgatcgagcagcaaacgctctggcggaccagcaacggcgacgtcttgcagaagcgacgc
cgctctccgttcacgatattctcgactacggtgaaggataagattaacgtgagcaacgag
aataagtgcagccgtcgcactggacggtccaaattaagcaagaatatcgtaaagttgtgg
gaaaacgccgatgaggaattaaaatttggatttaaaaagtactgtgaacgttcgcctgac
cccttgaacagtatagaacagcccgacgccaccttcggggcgttatccgaacaattacag
tcgttgatcgccaaacactcgtactacaacaagaaaaaagacaaggagttccaaaggatg
gtcagatacaaggccatgcagtctctgtgcgcacccggcgagcccgtcggacttctggcg
gcgcaatccatcggcgagccgtccacccaaatgaccttgaacacgtttcattttgccggt
agaggcgaaatgaacgtcacgctgggaataccgcgcctgcgcgaaattttaatgatggcg
tcgaaaaacccgaagacgccgtcgatggaagttccgtttctgaacgttcccaatcaggag
aagcgcgccgagcacttgaggcgaatactgacgagggttacggtcgcggacgtcttggag
aagatcgaggtggtcgtgcggcaggaaaccgagccggtcaggcagatgaagtaccggctg
cgattcaacttcctgccgcacgagctctacagcagcaagtacaacatcaaaccgaaagga
gttttgaaacacatgacgaagaagtatttcgcccaaatgttcacgttactgaaacggcaa
acaaagatggtcactaatgtggtggtgatggggaaggataaggggagtagaaacaaggac
gacgacgatgatgacgacgtgccggagccgacgcaacccaaggttgaggacagtgatgat
tcgggcgatgagcctgaagacacggaggatgccaagttggtcactaaatatgagcaagct
aatgacgatcaagagaacgaagaggaggtcaagtcggatgatgacgaggaagtaagtgag
cccgatgatgccgtcgccgatcatcaagaagttgtagactcgtacgtgtacgctcaaaat
tacgtgttcgacaaaaagaagtacttatggtgcgaattgacttttgccctacctttgact
cacaaaaaattagacatgaccagcattctgagggatgtggctaacaagtcggtcatcttt
gaaacgcccaacatcaaacgggcgatcacttacatcaaggacaatacgttgatactacgc
acggatggcatcaatatcacggaaatgttcaagtacaacgacctgctcgacttgaacaag
ctgtactcgaatgacatacacaaattcggcgaaacgtacggcatcgaagccgcgacgaaa
gtcgtggtcaaagaagttcaggaggtctttaaggtttacggcatcacggtcgacccccgc
catctcctcctaatcgccgactacatgatgttcaacgggacgttcgagccgctcagtcgg
cgaggtatgagcagcagcgcgtcgcccttccagcagatgtcgttcgaggcgtccctaaac
tttctcaagttggccaccgtgaacgcgaaacgggataacctgcagaatccgtcgagctgc
ctcgtgctgggtaaaccgtgtcactcgggcaccggggcgtttaagttgctgcaaagaatg
cagttggcgaaatgttaa
DBGET
integrated database retrieval system
